Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | OO986_RS01715 | Genome accession | NZ_AP026552 |
| Coordinates | 360272..360784 (+) | Length | 170 a.a. |
| NCBI ID | WP_011079355.1 | Uniprot ID | Q7MH81 |
| Organism | Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 355272..365784
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO986_RS01695 (VV208B2_03070) | - | 355459..357972 (-) | 2514 | WP_108695087.1 | penicillin-binding protein 1A | - |
| OO986_RS01700 (VV208B2_03080) | pilM | 358112..359119 (+) | 1008 | WP_011151279.1 | type IV pilus assembly protein PilM | Machinery gene |
| OO986_RS01705 (VV208B2_03090) | pilN | 359109..359699 (+) | 591 | WP_045598453.1 | PilN domain-containing protein | Machinery gene |
| OO986_RS01710 (VV208B2_03100) | pilO | 359692..360282 (+) | 591 | WP_011079354.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| OO986_RS01715 (VV208B2_03110) | pilP | 360272..360784 (+) | 513 | WP_011079355.1 | pilus assembly protein PilP | Machinery gene |
| OO986_RS01720 (VV208B2_03120) | pilQ | 360798..362582 (+) | 1785 | WP_108695110.1 | type IV pilus secretin PilQ | Machinery gene |
| OO986_RS01725 (VV208B2_03130) | aroK | 362784..363302 (+) | 519 | WP_011079357.1 | shikimate kinase AroK | - |
| OO986_RS01730 (VV208B2_03140) | aroB | 363335..364426 (+) | 1092 | WP_011079358.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19034.13 Da Isoelectric Point: 10.2810
>NTDB_id=96354 OO986_RS01715 WP_011079355.1 360272..360784(+) (pilP) [Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp]
MRSSLSLVAVLVLLSGCRANTEPMEGFIRQVESEARQEMAKLQPEREYIPIDYLARENRRPFELPKEAVIASQPVVKKDC
WQPPSRAKNGKLERYPLSQLRLKGVMGSGNTIAGLVQTPQGKVEKVHPGQFIGQNNGKVTVVTPSYILINETLPDGLGCW
QQRKVRLALR
MRSSLSLVAVLVLLSGCRANTEPMEGFIRQVESEARQEMAKLQPEREYIPIDYLARENRRPFELPKEAVIASQPVVKKDC
WQPPSRAKNGKLERYPLSQLRLKGVMGSGNTIAGLVQTPQGKVEKVHPGQFIGQNNGKVTVVTPSYILINETLPDGLGCW
QQRKVRLALR
Nucleotide
Download Length: 513 bp
>NTDB_id=96354 OO986_RS01715 WP_011079355.1 360272..360784(+) (pilP) [Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp]
ATGAGAAGTAGTTTATCGCTCGTCGCTGTGTTGGTCTTGCTATCGGGTTGTCGAGCGAATACCGAACCGATGGAAGGTTT
TATCCGCCAAGTTGAATCGGAAGCACGTCAAGAAATGGCCAAGTTACAGCCAGAGCGCGAGTACATCCCGATTGATTACT
TAGCTCGAGAAAATCGCCGTCCTTTTGAATTACCTAAGGAAGCCGTGATTGCCTCTCAACCTGTCGTTAAGAAAGACTGC
TGGCAGCCACCTTCACGGGCTAAAAATGGCAAGTTGGAGCGTTATCCACTTAGCCAATTGCGTCTGAAAGGGGTGATGGG
GAGTGGCAATACCATTGCCGGTCTCGTACAGACTCCACAAGGCAAAGTGGAGAAAGTTCACCCAGGGCAATTTATCGGCC
AGAACAATGGCAAAGTGACCGTAGTAACGCCGTCTTACATATTGATCAATGAAACCCTTCCTGATGGTTTAGGTTGCTGG
CAGCAACGTAAAGTCAGACTGGCATTGAGATAG
ATGAGAAGTAGTTTATCGCTCGTCGCTGTGTTGGTCTTGCTATCGGGTTGTCGAGCGAATACCGAACCGATGGAAGGTTT
TATCCGCCAAGTTGAATCGGAAGCACGTCAAGAAATGGCCAAGTTACAGCCAGAGCGCGAGTACATCCCGATTGATTACT
TAGCTCGAGAAAATCGCCGTCCTTTTGAATTACCTAAGGAAGCCGTGATTGCCTCTCAACCTGTCGTTAAGAAAGACTGC
TGGCAGCCACCTTCACGGGCTAAAAATGGCAAGTTGGAGCGTTATCCACTTAGCCAATTGCGTCTGAAAGGGGTGATGGG
GAGTGGCAATACCATTGCCGGTCTCGTACAGACTCCACAAGGCAAAGTGGAGAAAGTTCACCCAGGGCAATTTATCGGCC
AGAACAATGGCAAAGTGACCGTAGTAACGCCGTCTTACATATTGATCAATGAAACCCTTCCTGATGGTTTAGGTTGCTGG
CAGCAACGTAAAGTCAGACTGGCATTGAGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
64.072 |
98.235 |
0.629 |
| pilP | Vibrio cholerae strain A1552 |
59.036 |
97.647 |
0.576 |