Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   NSQ90_RS25730 Genome accession   NZ_CP150149
Coordinates   5792358..5794118 (+) Length   586 a.a.
NCBI ID   WP_042191743.1    Uniprot ID   A0A089IU09
Organism   Paenibacillus sp. FSL H7-0737     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 5787358..5799118
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ90_RS25710 (NSQ90_25710) - 5788204..5788875 (+) 672 WP_042191734.1 response regulator transcription factor -
  NSQ90_RS25715 (NSQ90_25715) - 5788872..5789951 (+) 1080 WP_042191736.1 HAMP domain-containing sensor histidine kinase -
  NSQ90_RS25720 (NSQ90_25720) - 5789948..5790433 (+) 486 WP_042191738.1 GNAT family N-acetyltransferase -
  NSQ90_RS25725 (NSQ90_25725) rcrP 5790601..5792358 (+) 1758 WP_042191741.1 ABC transporter ATP-binding protein Regulator
  NSQ90_RS25730 (NSQ90_25730) rcrQ 5792358..5794118 (+) 1761 WP_042191743.1 ABC transporter ATP-binding protein Regulator
  NSQ90_RS25735 (NSQ90_25735) - 5794192..5794980 (-) 789 WP_042194519.1 RNA methyltransferase -
  NSQ90_RS25740 (NSQ90_25740) - 5795239..5795898 (-) 660 WP_042191745.1 TrkA family potassium uptake protein -
  NSQ90_RS25745 (NSQ90_25745) - 5796035..5796271 (+) 237 WP_042191747.1 small acid-soluble spore protein SspI -
  NSQ90_RS25750 (NSQ90_25750) - 5796370..5797968 (-) 1599 WP_042191749.1 peptide chain release factor 3 -

Sequence


Protein


Download         Length: 586 a.a.        Molecular weight: 64070.38 Da        Isoelectric Point: 7.1379

>NTDB_id=963437 NSQ90_RS25730 WP_042191743.1 5792358..5794118(+) (rcrQ) [Paenibacillus sp. FSL H7-0737]
MKTKNKGQNTWSKLLRYCRKYVPVIVIALICAAAGTVLTLFGPDKLSEITDKITAGLAGSIDMDGITTIGITLVIIYGVG
ALLSLSQGLIMSIITQKVSKKLRTDLAHKMNKLPISYYNKSATGDILSRVTNDVDTIGQSMNQSIGNVVTALAMFVGSVV
MMLKTNVIMTLTAIVATIIGFGLMVVIMKKSQKYFASQQEYLGKINGHVEEVYTGHNVVKAYNGEAQMRTTFQELNQGLK
NSAFKAQFLSGLMPPLMGFIGNLGFVAVCIVGGVLAMNGTISFGVIVAFIMYVRYFTQPLSQIAQAAQSLQAASAAGGRV
FEFLEAEEMEDESHKENTLPTAKGKVKFDQVQFAYETSEKLIINNFSTDVKPGQKVAIVGPTGAGKTTLVNLLIRFNELT
GGEIYIDDMPISSLTRENIHDLFCMVLQDTWLFEGTIKENLIYNQQNITDEKLIEACKSVGLHRFIKSLSDGYNTVLNDK
VNLSAGQKQQLTIARAMLKDAPMLILDEATSSVDTRTELLIQQAMDKLMEGRTSFVIAHRLSTIKNADVILVLKDGDILE
SGSHAELLAQNGFYAELYNSQFEQAS

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=963437 NSQ90_RS25730 WP_042191743.1 5792358..5794118(+) (rcrQ) [Paenibacillus sp. FSL H7-0737]
ATGAAAACCAAAAATAAAGGCCAGAATACATGGAGCAAGCTGCTCCGCTACTGCCGTAAATATGTTCCGGTTATTGTGAT
TGCGCTAATCTGCGCGGCAGCTGGAACGGTGCTCACGTTATTCGGCCCGGACAAACTCTCCGAGATCACCGACAAAATTA
CAGCTGGTCTTGCCGGCAGCATCGATATGGACGGCATTACTACCATTGGCATTACCCTCGTCATAATTTACGGCGTCGGT
GCGTTGTTGTCACTCTCGCAAGGCTTGATCATGTCGATTATTACCCAGAAGGTCTCGAAGAAATTAAGAACTGATCTGGC
TCATAAAATGAACAAACTTCCAATCTCCTACTATAATAAATCGGCCACAGGTGATATTTTATCCCGGGTAACGAATGATG
TAGATACCATCGGGCAATCGATGAATCAGAGTATTGGTAATGTCGTAACCGCCTTAGCTATGTTCGTCGGTTCGGTCGTC
ATGATGCTGAAGACCAATGTAATTATGACCCTTACCGCTATCGTGGCAACGATCATCGGCTTTGGCCTTATGGTGGTCAT
TATGAAGAAATCGCAGAAATATTTTGCTAGCCAGCAGGAGTATTTAGGTAAAATCAACGGTCATGTCGAAGAAGTGTACA
CAGGACATAATGTAGTTAAAGCGTATAATGGCGAAGCGCAGATGCGCACTACCTTCCAGGAATTAAATCAGGGACTGAAG
AACAGCGCCTTCAAAGCACAATTCCTCTCTGGGCTGATGCCACCCCTGATGGGCTTTATTGGTAATCTTGGATTCGTTGC
CGTCTGTATCGTTGGAGGTGTACTCGCCATGAACGGTACGATTTCATTTGGGGTTATCGTCGCCTTCATTATGTATGTAC
GTTACTTTACCCAGCCGTTGTCTCAGATTGCCCAGGCCGCGCAGAGCCTGCAAGCTGCATCTGCAGCTGGCGGACGCGTG
TTCGAATTTCTGGAGGCTGAGGAAATGGAAGACGAGAGTCACAAAGAGAACACACTGCCAACTGCTAAAGGTAAAGTGAA
ATTTGACCAAGTACAATTTGCGTATGAGACTTCAGAAAAACTGATTATCAATAACTTCTCGACAGATGTAAAACCTGGGC
AAAAAGTGGCGATCGTTGGTCCTACCGGCGCAGGCAAAACTACGTTGGTCAATCTGCTCATCCGGTTCAACGAATTAACG
GGTGGAGAAATCTACATCGATGATATGCCGATCAGCAGCCTTACGAGAGAGAACATTCATGATCTGTTCTGTATGGTCCT
GCAGGATACCTGGCTGTTTGAGGGTACCATCAAAGAGAACCTGATTTACAATCAGCAGAACATTACAGACGAGAAGCTTA
TAGAGGCTTGCAAGTCCGTTGGCCTGCACCGCTTCATTAAATCCTTAAGTGACGGATACAACACCGTACTGAACGATAAA
GTTAATCTGTCCGCCGGACAAAAGCAGCAGCTGACCATCGCTCGCGCGATGCTGAAAGATGCGCCGATGCTCATTCTTGA
TGAAGCTACAAGCTCAGTGGATACCCGTACAGAGCTGCTGATTCAGCAGGCAATGGATAAGCTTATGGAAGGCAGAACCT
CTTTCGTTATCGCACACCGGCTCTCAACGATTAAGAATGCTGATGTGATTCTGGTCCTGAAGGACGGCGATATCCTGGAA
AGCGGCAGCCACGCAGAATTGCTGGCTCAGAACGGATTCTATGCAGAGCTCTACAATAGCCAGTTTGAGCAGGCTTCTTA
A


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A089IU09

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

57.143

99.147

0.567