Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   WMC18_RS16055 Genome accession   NZ_CP150130
Coordinates   3176682..3178982 (-) Length   766 a.a.
NCBI ID   WP_406842664.1    Uniprot ID   -
Organism   Bacillus velezensis strain SEC-482     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3171682..3183982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WMC18_RS16015 (WMC18_15980) - 3172142..3172573 (+) 432 WP_003152066.1 Na(+)/H(+) antiporter subunit B -
  WMC18_RS16020 (WMC18_15985) - 3172573..3172914 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  WMC18_RS16025 (WMC18_15990) - 3172907..3174388 (+) 1482 WP_014305717.1 Na+/H+ antiporter subunit D -
  WMC18_RS16030 (WMC18_15995) - 3174394..3174870 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  WMC18_RS16035 (WMC18_16000) - 3174870..3175154 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  WMC18_RS16040 (WMC18_16005) mnhG 3175138..3175512 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  WMC18_RS16045 (WMC18_16010) - 3175552..3175935 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  WMC18_RS16050 (WMC18_16015) comA 3175957..3176601 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  WMC18_RS16055 (WMC18_16020) comP 3176682..3178982 (-) 2301 WP_406842664.1 histidine kinase Regulator
  WMC18_RS16060 (WMC18_16025) comX 3178996..3179169 (-) 174 WP_012118314.1 competence pheromone ComX -
  WMC18_RS16065 (WMC18_16030) - 3179138..3179998 (-) 861 WP_159073777.1 polyprenyl synthetase family protein -
  WMC18_RS16070 (WMC18_16035) degQ 3180206..3180346 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  WMC18_RS16075 (WMC18_16040) - 3180812..3181153 (+) 342 WP_014305721.1 hypothetical protein -
  WMC18_RS16080 (WMC18_16045) - 3181160..3182380 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  WMC18_RS16085 (WMC18_16050) - 3182510..3183976 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88284.56 Da        Isoelectric Point: 7.1698

>NTDB_id=963074 WMC18_RS16055 WP_406842664.1 3176682..3178982(-) (comP) [Bacillus velezensis strain SEC-482]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITIGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMISKVCVLEVEGDLNIRCFFNDNEKKLWEPYSHQLAETTSEIGKIVQV
DKGFLMKIGERGSKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGC
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=963074 WMC18_RS16055 WP_406842664.1 3176682..3178982(-) (comP) [Bacillus velezensis strain SEC-482]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTGATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTGTTTGTAGGAGCCACCGCAAATGTTAATAACAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCTTATTATGCTGGTGTTAAAAAAGGTGACATTGTAATAAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTTAGATCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTCAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACAGGTATAGCATAT
GTGAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTATCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATTTAGTA
TCAATATCTCTCCTTTATTTAATAGCTTTATTTTTCATTACCATAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTCTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGATAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCATTAAAACAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGATTAGTAAAGTATGTGTTTTAGAAGTAGAAGGAGACTTAAATATAAGGTGTTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCTGAAACGACAAGCGAAATTGGCAAAATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCAGTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACCTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTACACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCACCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTACTGTATGATTTGGGTCTG
GTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGC
AATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(566-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.397

100

0.564