Detailed information NTG0962913

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACJEHU_RS09120
• Genome accession: NZ_CP174221
• Coordinates: 2050727..2052001 (-)
• Length: 424 a.a.
• NCBI ID: WP_408070687.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain SPF646
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2045727..2057001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJEHU_RS09110 (ACJEHU_09110)	-	2047632..2047910 (-)	279	WP_011214112.1	HU family DNA-binding protein	-
ACJEHU_RS09115 (ACJEHU_09115)	lon	2048039..2050489 (-)	2451	WP_010947583.1	endopeptidase La	-
ACJEHU_RS09120 (ACJEHU_09120)	clpX	2050727..2052001 (-)	1275	WP_408070687.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACJEHU_RS09125 (ACJEHU_09125)	clpP	2052142..2052786 (-)	645	WP_010947585.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
ACJEHU_RS09130 (ACJEHU_09130)	tig	2052789..2054120 (-)	1332	WP_010947586.1	trigger factor	-
ACJEHU_RS09155 (ACJEHU_09155)	-	2054982..2056208 (+)	1227	WP_010947587.1	site-specific integrase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 46555.12 Da
• Isoelectric Point: 5.1603

>NTDB_id=962913 ACJEHU_RS09120 WP_408070687.1 2050727..2052001(-) (clpX) [Legionella pneumophila strain SPF646]
MSKSGNGNGDKVLYCSFCGKSQHEVKKLIAGPSVFVCDECVELCNDIIREETHETHEETEARLPTPKEISNFLDEYVIGQ
QHAKKVLSVAVYNHYKRLQHKSEDGVELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENII
QKLLQKCDYDADKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTSN
ILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDEVSKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAAL
IDILTRPKNALTKQFQSLFKMEGSELEFRGEALIAIAKKALERKMGARGLRSILENILLDTMYDLPSLEGVNKVVIDESV
VNGLSKPILIYEQDEKKSASGSKD

Nucleotide

• Length: 1275 bp

>NTDB_id=962913 ACJEHU_RS09120 WP_408070687.1 2050727..2052001(-) (clpX) [Legionella pneumophila strain SPF646]
ATGAGTAAATCCGGTAACGGAAATGGAGATAAGGTCTTATATTGCTCTTTTTGTGGCAAGAGTCAACATGAGGTAAAAAA
ATTAATTGCTGGACCTTCTGTGTTTGTTTGTGATGAATGTGTAGAGCTTTGTAATGATATTATTCGAGAAGAGACGCATG
AAACTCATGAAGAAACTGAGGCACGTCTACCGACACCAAAAGAAATATCTAACTTTCTCGATGAATACGTAATAGGGCAA
CAACATGCCAAAAAGGTTTTATCAGTAGCAGTATATAATCACTATAAGAGATTACAGCATAAAAGCGAGGATGGTGTTGA
GCTCGGCAAAAGTAATATTTTACTTATAGGACCTACTGGCAGTGGTAAGACTCTTTTAGCTCAAACCCTGGCGCGGATTC
TTAATGTTCCTTTTGCCATGGCTGATGCCACGACCCTTACTGAAGCTGGATATGTTGGCGAAGACGTTGAAAATATTATC
CAGAAGTTATTACAGAAGTGCGACTATGATGCAGATAAGGCACAGCAAGGTATTGTCTATATCGACGAAATCGATAAGAT
TTCACGCAAATCAGATAATCCATCTATCACCAGAGATGTTTCAGGAGAAGGTGTTCAACAAGCTTTACTGAAATTAATTG
AAGGTACTGTTGCATCTGTTCCACCGCAAGGTGGGCGAAAGCATCCACAGCAGGAATTTTTGCAGGTAGATACATCAAAT
ATTTTATTTATCTGTGGTGGCGCTTTTGCAGGTTTGGACAAAGTAATACGTGAACGCAGCGATAAATCAAGCATAGGTTT
TTCTGCTCAATTAAAAAGCAAAAAAAGCAGTAATGATGAAGTTTCAAAAGTTTTAGGTCAATTGGAATCAGATGATTTAA
TTAAATATGGGTTGATTCCCGAGTTTGTTGGACGTTTGCCTGTTGTAACCACTTTACAGGAACTTGATGAAGCGGCATTG
ATTGATATATTAACGAGACCTAAGAATGCTTTAACAAAGCAATTTCAATCACTTTTCAAAATGGAAGGTTCTGAACTTGA
GTTTAGAGGCGAAGCTTTGATTGCTATTGCTAAAAAGGCCCTCGAAAGAAAAATGGGCGCAAGAGGTTTGCGATCAATAC
TTGAAAATATTCTTTTAGACACTATGTATGACTTACCTTCCTTGGAAGGCGTGAATAAGGTTGTTATTGATGAGAGTGTA
GTGAATGGACTATCTAAACCGATTCTCATTTATGAACAGGATGAGAAAAAAAGTGCGTCTGGTAGTAAAGATTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-308)

• ClpX C4-type zinc finger (zf-C4_ClpX) (13-50)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.413	96.462	0.573
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.68	95.755	0.524