Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACJED3_RS12180 Genome accession   NZ_CP174155
Coordinates   2275016..2275810 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain G01     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2270016..2280810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJED3_RS12160 walR 2270258..2270965 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  ACJED3_RS12165 walK 2270973..2272808 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  ACJED3_RS12170 walH 2272798..2274165 (+) 1368 WP_014481474.1 WalRK two-component regulatory system regulator WalH -
  ACJED3_RS12175 walI 2274152..2274994 (+) 843 WP_014481473.1 WalRK two-component regulatory system regulator WalI -
  ACJED3_RS12180 vicX 2275016..2275810 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  ACJED3_RS12185 htrA 2275892..2277094 (+) 1203 WP_014481472.1 serine protease HtrC Regulator
  ACJED3_RS12190 - 2277115..2277247 (+) 133 Protein_2346 hypothetical protein -
  ACJED3_RS12195 - 2277275..2277427 (+) 153 Protein_2347 ATP-binding protein -
  ACJED3_RS12200 rocR 2277409..2278794 (-) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  ACJED3_RS12205 - 2279021..2279305 (+) 285 WP_015715052.1 autorepressor SdpR family transcription factor -
  ACJED3_RS12210 - 2279305..2279940 (+) 636 WP_014481470.1 SdpI family protein -
  ACJED3_RS12215 - 2280196..2280678 (+) 483 WP_162105773.1 SdpA family antimicrobial peptide system protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=961985 ACJED3_RS12180 WP_003226939.1 2275016..2275810(+) (vicX) [Bacillus subtilis strain G01]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=961985 ACJED3_RS12180 WP_003226939.1 2275016..2275810(+) (vicX) [Bacillus subtilis strain G01]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTTGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTGGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGGAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAAAC
AGTGAAGTCGTTCGGCGGACTTGATGTTGAATCATTTGGCGTTTCCCACGATGCGGCCGAGCCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGAAGATACCCGTGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53