Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACJED3_RS11620 Genome accession   NZ_CP174155
Coordinates   2173543..2174370 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain G01     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2168543..2179370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJED3_RS11595 abrB 2170889..2171179 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  ACJED3_RS11600 rsmI 2171228..2172106 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACJED3_RS11605 yazA 2172081..2172380 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  ACJED3_RS11610 trmNF 2172367..2173110 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ACJED3_RS11615 yabA 2173169..2173528 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  ACJED3_RS11620 yaaT 2173543..2174370 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  ACJED3_RS11625 holB 2174373..2175362 (-) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  ACJED3_RS11630 yaaR 2175374..2175814 (-) 441 WP_009966249.1 YaaR family protein -
  ACJED3_RS11635 darA 2175827..2176156 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  ACJED3_RS11640 tmk 2176230..2176868 (-) 639 WP_003226776.1 dTMP kinase -
  ACJED3_RS11645 efpO 2176865..2178307 (-) 1443 WP_014478592.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=961979 ACJED3_RS11620 WP_003226767.1 2173543..2174370(-) (yaaT) [Bacillus subtilis strain G01]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=961979 ACJED3_RS11620 WP_003226767.1 2173543..2174370(-) (yaaT) [Bacillus subtilis strain G01]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996