Detailed information NTG0961707

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: WKW49_RS04795
• Genome accession: NZ_CP149819
• Coordinates: 1127570..1128955 (-)
• Length: 461 a.a.
• NCBI ID: WP_339067575.1
• Uniprot ID: -
• Organism: Teredinibacter turnerae strain SR02026
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1122570..1133955

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKW49_RS04785 (WKW49_04785)	-	1126292..1126735 (+)	444	WP_015817513.1	type IV pilin protein	-
WKW49_RS04790 (WKW49_04790)	-	1126873..1127451 (-)	579	WP_339067572.1	GspH/FimT family pseudopilin	-
WKW49_RS04795 (WKW49_04795)	pilR	1127570..1128955 (-)	1386	WP_339067575.1	sigma-54 dependent transcriptional regulator	Regulator
WKW49_RS04800 (WKW49_04800)	-	1128958..1130556 (-)	1599	WP_339067577.1	ATP-binding protein	-
WKW49_RS04805 (WKW49_04805)	-	1130885..1132513 (+)	1629	WP_339067579.1	NAD+ synthase	-
WKW49_RS04810 (WKW49_04810)	-	1132510..1133415 (-)	906	WP_339075101.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 461 a.a.
• Molecular weight: 50526.75 Da
• Isoelectric Point: 4.9989

>NTDB_id=961707 WKW49_RS04795 WP_339067575.1 1127570..1128955(-) (pilR) [Teredinibacter turnerae strain SR02026]
MASVHALIIDDEPDIRELLEITLARMGVDVVSAANIAEAKQALTRGGFNICLTDMKLPDGNGIDLVRYIQKYDAELPVAV
ITAHGNMDTAIEAMKAGAFDFVSKPINLSALRKLIDTAITSNQLAAVPNVESESTNKIIGASETIISLKKSIKKLARSQA
PVYISGESGSGKELVARSVHELGPRSTSPFVAVNCGAIPSELMESEFFGHKKGAFTGASQEKQGLFQAADGGTLFLDEVA
DLPLEMQVKLLRAIQEKAIRPIGGQTEISTNVRILSATHKNLEELVNNGSFRQDLFYRLNVIQLKVPALRERKSDIPLLV
ESLLSRIAEACEMAPPSLGPKALQMLMDYDYPGNIRELENILERAFTLCEEDVINDTDLQINQNSAVIGESSVDRVSKFS
HYTASKNHDSIDDYLAEVEKEILCETLEHTRWNKTLAAKKLGISFRSLRYRLAKLGLDDSD

Nucleotide

• Length: 1386 bp

>NTDB_id=961707 WKW49_RS04795 WP_339067575.1 1127570..1128955(-) (pilR) [Teredinibacter turnerae strain SR02026]
ATGGCCAGCGTTCACGCACTCATAATCGACGACGAACCCGACATCCGCGAACTGCTCGAAATTACTCTCGCTCGTATGGG
GGTCGATGTGGTAAGCGCAGCTAATATTGCTGAAGCAAAACAGGCCCTGACCAGGGGAGGATTCAATATTTGCTTGACGG
ACATGAAGCTGCCTGATGGGAACGGAATTGATCTGGTTAGATACATTCAGAAATATGATGCAGAGTTACCGGTCGCCGTA
ATTACCGCACACGGGAATATGGACACGGCGATTGAAGCCATGAAAGCAGGCGCGTTTGATTTTGTTAGTAAGCCCATCAA
CCTGAGCGCGTTGCGAAAGCTGATTGATACCGCCATTACGTCGAACCAATTAGCTGCAGTGCCAAACGTCGAAAGTGAAA
GTACCAACAAAATTATTGGCGCTTCCGAAACGATCATCTCACTAAAAAAATCCATTAAAAAATTAGCCCGCTCACAAGCG
CCGGTTTATATTAGTGGCGAATCGGGCAGCGGGAAGGAATTGGTCGCACGTTCAGTTCATGAGCTGGGGCCTCGCTCGAC
TAGTCCATTTGTGGCAGTAAATTGCGGCGCAATTCCCAGTGAACTCATGGAGAGCGAATTTTTCGGCCACAAAAAAGGAG
CTTTTACCGGCGCATCCCAGGAAAAACAAGGATTGTTTCAGGCCGCAGATGGCGGCACCCTTTTTCTGGATGAAGTCGCT
GACTTACCTCTGGAAATGCAAGTCAAATTACTTCGTGCTATTCAGGAAAAAGCCATTCGCCCAATTGGCGGCCAAACAGA
AATTTCTACGAATGTAAGAATCCTGTCAGCGACTCATAAAAACCTTGAGGAACTGGTTAACAATGGCAGTTTCCGTCAGG
ATCTGTTTTATCGGCTCAATGTTATTCAATTAAAAGTGCCAGCGTTGCGTGAACGCAAATCGGACATACCATTGCTCGTG
GAATCGCTTCTCTCCCGCATTGCTGAAGCCTGCGAAATGGCGCCCCCAAGCCTCGGCCCCAAAGCACTCCAGATGTTGAT
GGATTACGACTACCCAGGCAACATTCGCGAACTGGAAAACATTCTCGAACGCGCTTTCACGCTTTGCGAAGAAGACGTAA
TAAATGACACCGATCTGCAAATCAACCAAAACTCTGCCGTTATTGGTGAAAGCAGTGTGGACAGAGTGTCAAAATTCAGT
CACTATACTGCAAGCAAAAACCACGATTCTATCGACGATTATCTTGCTGAAGTGGAAAAGGAAATCCTCTGCGAGACGCT
CGAACACACCCGCTGGAATAAAACACTGGCGGCAAAAAAGCTGGGTATCAGTTTTCGTTCATTGCGTTATCGTTTAGCGA
AACTGGGTTTGGACGACTCTGATTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (415-455)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	57.701	100	0.577
pilR	Acinetobacter baumannii strain A118	48.69	99.349	0.484