Detailed information NTG0961684

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: WKI14_RS04740
• Genome accession: NZ_CP149818
• Coordinates: 1129574..1130959 (-)
• Length: 461 a.a.
• NCBI ID: WP_339067575.1
• Uniprot ID: -
• Organism: Teredinibacter turnerae strain SR01903
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1124574..1135959

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKI14_RS04730 (WKI14_04730)	-	1128296..1128739 (+)	444	WP_015817513.1	type IV pilin protein	-
WKI14_RS04735 (WKI14_04735)	-	1128877..1129455 (-)	579	WP_339067572.1	GspH/FimT family pseudopilin	-
WKI14_RS04740 (WKI14_04740)	pilR	1129574..1130959 (-)	1386	WP_339067575.1	sigma-54 dependent transcriptional regulator	Regulator
WKI14_RS04745 (WKI14_04745)	-	1130962..1132560 (-)	1599	WP_339067577.1	ATP-binding protein	-
WKI14_RS04750 (WKI14_04750)	-	1132889..1134517 (+)	1629	WP_339067579.1	NAD+ synthase	-
WKI14_RS04755 (WKI14_04755)	-	1134514..1135419 (-)	906	WP_015819921.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 461 a.a.
• Molecular weight: 50526.75 Da
• Isoelectric Point: 4.9989

>NTDB_id=961684 WKI14_RS04740 WP_339067575.1 1129574..1130959(-) (pilR) [Teredinibacter turnerae strain SR01903]
MASVHALIIDDEPDIRELLEITLARMGVDVVSAANIAEAKQALTRGGFNICLTDMKLPDGNGIDLVRYIQKYDAELPVAV
ITAHGNMDTAIEAMKAGAFDFVSKPINLSALRKLIDTAITSNQLAAVPNVESESTNKIIGASETIISLKKSIKKLARSQA
PVYISGESGSGKELVARSVHELGPRSTSPFVAVNCGAIPSELMESEFFGHKKGAFTGASQEKQGLFQAADGGTLFLDEVA
DLPLEMQVKLLRAIQEKAIRPIGGQTEISTNVRILSATHKNLEELVNNGSFRQDLFYRLNVIQLKVPALRERKSDIPLLV
ESLLSRIAEACEMAPPSLGPKALQMLMDYDYPGNIRELENILERAFTLCEEDVINDTDLQINQNSAVIGESSVDRVSKFS
HYTASKNHDSIDDYLAEVEKEILCETLEHTRWNKTLAAKKLGISFRSLRYRLAKLGLDDSD

Nucleotide

• Length: 1386 bp

>NTDB_id=961684 WKI14_RS04740 WP_339067575.1 1129574..1130959(-) (pilR) [Teredinibacter turnerae strain SR01903]
ATGGCCAGCGTTCACGCACTCATAATCGACGACGAACCCGACATCCGCGAACTGCTCGAAATTACTCTCGCTCGCATGGG
GGTCGATGTGGTAAGCGCAGCTAATATTGCTGAAGCAAAACAGGCCCTGACCAGGGGAGGATTCAATATTTGCTTGACGG
ACATGAAGCTGCCTGATGGGAACGGAATTGATCTGGTTAGATACATTCAGAAATATGATGCAGAGTTACCGGTCGCCGTA
ATTACCGCACACGGGAATATGGACACGGCGATTGAAGCCATGAAAGCAGGCGCGTTTGATTTTGTTAGTAAGCCCATCAA
CCTGAGCGCGTTGCGAAAGCTGATTGATACCGCCATTACGTCGAACCAATTAGCTGCAGTGCCAAACGTCGAAAGTGAAA
GTACCAACAAAATTATTGGCGCTTCCGAAACGATCATCTCACTAAAAAAATCCATTAAAAAATTAGCCCGCTCACAAGCG
CCGGTTTATATTAGTGGCGAATCGGGCAGCGGGAAGGAATTGGTCGCACGTTCAGTTCATGAGCTGGGGCCTCGCTCGAC
TAGTCCATTTGTGGCAGTAAATTGCGGCGCAATTCCCAGTGAACTCATGGAGAGCGAATTTTTCGGCCACAAAAAAGGAG
CTTTTACCGGCGCATCCCAGGAAAAACAAGGATTGTTTCAGGCCGCAGATGGCGGCACCCTTTTTCTGGATGAAGTCGCT
GACTTACCTCTGGAAATGCAAGTCAAATTACTTCGTGCTATTCAGGAAAAAGCCATTCGCCCAATTGGCGGCCAAACAGA
AATTTCTACGAATGTAAGAATCCTGTCAGCGACTCATAAAAACCTTGAGGAACTGGTTAACAATGGCAGTTTCCGTCAGG
ATCTGTTTTATCGGCTCAATGTTATTCAATTAAAAGTGCCAGCGTTGCGTGAACGCAAATCGGACATACCATTGCTCGTG
GAATCGCTTCTCTCCCGCATTGCTGAAGCCTGCGAAATGGCGCCCCCAAGCCTCGGCCCCAAAGCACTCCAGATGTTGAT
GGATTACGACTACCCAGGCAACATTCGCGAACTGGAAAACATTCTCGAACGCGCTTTCACGCTTTGCGAAGAAGACGTAA
TAAATGACACCGATCTGCAAATCAACCAAAACTCTGCCGTTATTGGTGAAAGCAGTGTGGACAGAGTGTCAAAATTCAGT
CACTATACTGCAAGCAAAAACCACGATTCTATCGACGATTATCTTGCTGAAGTGGAAAAGGAAATCCTCTGCGAGACGCT
CGAACACACCCGCTGGAATAAAACACTGGCGGCAAAAAAGCTGGGTATCAGTTTTCGTTCATTGCGTTATCGTTTAGCGA
AACTGGGTTTGGACGACTCTGATTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (415-455)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	57.701	100	0.577
pilR	Acinetobacter baumannii strain A118	48.69	99.349	0.484