Detailed information NTG0961670

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: WKI13_RS16400
• Genome accession: NZ_CP149817
• Coordinates: 4140609..4141994 (+)
• Length: 461 a.a.
• NCBI ID: WP_018276671.1
• Uniprot ID: -
• Organism: Teredinibacter turnerae strain T7902
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4135609..4146994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKI13_RS16385 (WKI13_16385)	-	4136110..4137015 (+)	906	WP_018276668.1	outer membrane protein assembly factor BamD	-
WKI13_RS16390 (WKI13_16390)	-	4137012..4138640 (-)	1629	WP_018276669.1	NAD+ synthase	-
WKI13_RS16395 (WKI13_16395)	-	4139008..4140606 (+)	1599	WP_018276670.1	PAS domain-containing sensor histidine kinase	-
WKI13_RS16400 (WKI13_16400)	pilR	4140609..4141994 (+)	1386	WP_018276671.1	sigma-54 dependent transcriptional regulator	Regulator
WKI13_RS16405 (WKI13_16405)	-	4142111..4142689 (+)	579	WP_018276672.1	GspH/FimT family pseudopilin	-
WKI13_RS16410 (WKI13_16410)	-	4142932..4143375 (-)	444	WP_080639383.1	type IV pilin protein	-

Sequence

Protein

• Length: 461 a.a.
• Molecular weight: 50509.68 Da
• Isoelectric Point: 4.9348

>NTDB_id=961670 WKI13_RS16400 WP_018276671.1 4140609..4141994(+) (pilR) [Teredinibacter turnerae strain T7902]
MASVHALIIDDEPDIRELLEITLARMGVDVVSAANIAEAKQALTKGGFNICLTDMKLPDGNGIDLVRYIQKYDAELPVAV
ITAHGNMDTAIEAMKAGAFDFVSKPINLSALRKLIDTAITSNQLAAEPNVESESTNKIIGASETIIALKKSIKKLARSQA
PVYISGESGSGKELVARSVHELGPRSANPFVAVNCGAIPSELMESEFFGHKKGAFTGASQEKQGLFQAADGGTLFLDEVA
DLPLEMQVKLLRAIQEKAIRPIGGQTEISTNVRILSATHKNLEELVNNGNFRQDLFYRLNVIQLKVPALRERKSDIPLLV
ESLLSRIAEACDMAPPSLGAKALQMLMEYDYPGNIRELENILERAFTLCEDDVINDTDLQINQNSAVIGESSVDRVSKFS
HYNASKNHDSIDDYLAEVEKEILCETLEHTRWNKTLAAKKLGISFRSLRYRLAKLGLDDSD

Nucleotide

• Length: 1386 bp

>NTDB_id=961670 WKI13_RS16400 WP_018276671.1 4140609..4141994(+) (pilR) [Teredinibacter turnerae strain T7902]
ATGGCCAGCGTGCACGCACTGATAATCGACGATGAACCCGACATCCGCGAACTGCTCGAAATTACTCTCGCTCGCATGGG
AGTCGATGTCGTAAGCGCAGCCAATATTGCTGAAGCAAAACAAGCCCTGACAAAGGGCGGATTTAATATTTGCTTGACGG
ATATGAAGCTGCCTGACGGGAACGGGATTGATCTGGTTAGATATATTCAAAAATATGATGCAGAGCTACCCGTAGCAGTG
ATTACTGCACACGGGAATATGGACACAGCAATCGAAGCAATGAAGGCTGGCGCATTTGATTTTGTAAGTAAGCCCATCAA
CCTGAGCGCATTGCGAAAGCTGATTGATACCGCGATTACGTCGAACCAATTAGCTGCAGAGCCCAACGTCGAAAGTGAAA
GCACCAACAAAATTATTGGCGCTTCCGAAACTATTATCGCGCTAAAGAAATCCATTAAAAAATTAGCCCGATCACAAGCG
CCGGTTTATATCAGTGGCGAGTCGGGCAGCGGAAAGGAACTGGTCGCACGCTCAGTGCATGAGCTGGGGCCGCGTTCGGC
TAACCCATTTGTGGCGGTAAACTGTGGCGCAATTCCCAGTGAACTCATGGAGAGCGAATTTTTCGGCCACAAAAAAGGCG
CATTTACGGGTGCATCCCAGGAAAAGCAAGGCTTGTTTCAGGCCGCAGATGGCGGCACCCTTTTTCTGGATGAAGTCGCT
GACTTGCCTCTGGAAATGCAAGTCAAATTACTTCGCGCGATTCAAGAAAAAGCCATTCGTCCAATTGGCGGCCAGACAGA
AATATCTACCAATGTAAGAATCCTCTCTGCAACCCATAAAAACCTGGAAGAACTCGTTAACAATGGCAACTTCCGTCAGG
ACCTATTTTATCGCCTCAATGTTATCCAACTGAAAGTGCCGGCACTGCGTGAGCGAAAGTCGGACATTCCATTGCTCGTA
GAATCACTGCTTTCCCGCATTGCGGAAGCCTGCGATATGGCACCCCCAAGCCTCGGCGCGAAAGCGCTCCAAATGTTGAT
GGAGTACGATTACCCGGGCAACATTCGCGAACTGGAAAACATTCTCGAGCGTGCCTTCACACTTTGCGAAGATGACGTAA
TAAATGACACCGATCTGCAAATCAATCAAAACTCTGCCGTTATTGGTGAAAGCAGTGTGGACAGAGTGTCAAAATTCAGT
CACTATAATGCAAGCAAAAACCACGATTCTATCGACGATTATCTTGCTGAAGTGGAAAAGGAAATCCTCTGCGAGACGCT
CGAACACACCCGCTGGAATAAAACACTGGCGGCAAAAAAGCTGGGCATCAGTTTTCGTTCATTGCGTTATCGTTTAGCGA
AACTGGGTTTGGACGACTCTGATTAG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

• Bacterial regulatory protein, Fis family (HTH_8) (415-455)

• Response regulator receiver domain (Response_reg) (7-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	58.297	99.349	0.579
pilR	Acinetobacter baumannii strain A118	48.69	99.349	0.484