Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   UXR74_RS05865 Genome accession   NZ_CP149805
Coordinates   1202982..1203854 (+) Length   290 a.a.
NCBI ID   WP_339078597.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN122     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1197982..1208854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXR74_RS05845 (UXR74_05845) sucC 1198096..1199262 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  UXR74_RS05850 (UXR74_05850) sucD 1199284..1200192 (+) 909 WP_000110253.1 succinate--CoA ligase subunit alpha -
  UXR74_RS05855 (UXR74_05855) - 1200419..1201537 (+) 1119 WP_001041662.1 LysM peptidoglycan-binding domain-containing protein -
  UXR74_RS05860 (UXR74_05860) fmhC 1201565..1202809 (+) 1245 WP_000672867.1 FemA/FemB family glycyltransferase FmhC -
  UXR74_RS05865 (UXR74_05865) dprA 1202982..1203854 (+) 873 WP_339078597.1 DNA-processing protein DprA Machinery gene
  UXR74_RS05870 (UXR74_05870) topA 1204028..1206103 (+) 2076 WP_001548566.1 type I DNA topoisomerase -
  UXR74_RS05875 (UXR74_05875) trmFO 1206259..1207566 (+) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33564.99 Da        Isoelectric Point: 9.5094

>NTDB_id=961538 UXR74_RS05865 WP_339078597.1 1202982..1203854(+) (dprA) [Staphylococcus aureus strain BSN122]
MIKLFLLKLYWAHFSTKQIHQFLMAYPNVIKEEGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDSEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGIAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=961538 UXR74_RS05865 WP_339078597.1 1202982..1203854(+) (dprA) [Staphylococcus aureus strain BSN122]
TTGATTAAACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGAGGGAAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATTCTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCATTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATTGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCTGAATATCCACCACATACACCAATCGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

99.655

100

0.997
  dprA Staphylococcus aureus N315

99.31

100

0.993