Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   WKI56_RS01810 Genome accession   NZ_CP149650
Coordinates   361052..362005 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain MJ02     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 356052..367005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKI56_RS01785 (WKI56_01785) - 356099..357526 (+) 1428 WP_103527150.1 HAMP domain-containing sensor histidine kinase -
  WKI56_RS01790 (WKI56_01790) rapC 357685..358833 (+) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  WKI56_RS01795 (WKI56_01795) phrC 358817..358936 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  WKI56_RS01800 (WKI56_01800) - 359085..359180 (-) 96 WP_012116800.1 YjcZ family sporulation protein -
  WKI56_RS01805 (WKI56_01805) - 359274..360638 (-) 1365 WP_017419273.1 aspartate kinase -
  WKI56_RS01810 (WKI56_01810) ceuB 361052..362005 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  WKI56_RS01815 (WKI56_01815) - 361995..362942 (+) 948 WP_339078445.1 iron chelate uptake ABC transporter family permease subunit -
  WKI56_RS01820 (WKI56_01820) - 362936..363694 (+) 759 WP_339078446.1 ABC transporter ATP-binding protein -
  WKI56_RS01825 (WKI56_01825) - 363716..364660 (+) 945 WP_339078447.1 siderophore ABC transporter substrate-binding protein -
  WKI56_RS01830 (WKI56_01830) - 364702..366126 (-) 1425 WP_017419270.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=960326 WKI56_RS01810 WP_015239156.1 361052..362005(+) (ceuB) [Bacillus velezensis strain MJ02]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=960326 WKI56_RS01810 WP_015239156.1 361052..362005(+) (ceuB) [Bacillus velezensis strain MJ02]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCAACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTTGTCAAAGGCAGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCTCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536