Detailed information NTG0960324

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: WKI56_RS01790
• Genome accession: NZ_CP149650
• Coordinates: 357685..358833 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain MJ02
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 352685..363833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKI56_RS01770 (WKI56_01770)	-	353085..353768 (-)	684	WP_014416899.1	ABC transporter ATP-binding protein	-
WKI56_RS01775 (WKI56_01775)	-	353783..355216 (-)	1434	WP_339078444.1	ABC transporter permease	-
WKI56_RS01780 (WKI56_01780)	-	355429..356112 (+)	684	WP_014416901.1	response regulator transcription factor	-
WKI56_RS01785 (WKI56_01785)	-	356099..357526 (+)	1428	WP_103527150.1	HAMP domain-containing sensor histidine kinase	-
WKI56_RS01790 (WKI56_01790)	rapC	357685..358833 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
WKI56_RS01795 (WKI56_01795)	phrC	358817..358936 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
WKI56_RS01800 (WKI56_01800)	-	359085..359180 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
WKI56_RS01805 (WKI56_01805)	-	359274..360638 (-)	1365	WP_017419273.1	aspartate kinase	-
WKI56_RS01810 (WKI56_01810)	ceuB	361052..362005 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
WKI56_RS01815 (WKI56_01815)	-	361995..362942 (+)	948	WP_339078445.1	iron chelate uptake ABC transporter family permease subunit	-
WKI56_RS01820 (WKI56_01820)	-	362936..363694 (+)	759	WP_339078446.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=960324 WKI56_RS01790 WP_003156336.1 357685..358833(+) (rapC) [Bacillus velezensis strain MJ02]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=960324 WKI56_RS01790 WP_003156336.1 357685..358833(+) (rapC) [Bacillus velezensis strain MJ02]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568