Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   WIN67_RS28890 Genome accession   NZ_CP149586
Coordinates   6380473..6380877 (-) Length   134 a.a.
NCBI ID   WP_025131048.1    Uniprot ID   -
Organism   Pseudomonas idahonensis strain BIM B-1906     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6375473..6385877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WIN67_RS28875 (WIN67_28875) - 6377296..6379359 (-) 2064 WP_102881160.1 methyl-accepting chemotaxis protein -
  WIN67_RS28880 (WIN67_28880) - 6379500..6380039 (-) 540 WP_102881161.1 chemotaxis protein CheW -
  WIN67_RS28885 (WIN67_28885) pilH 6380050..6380415 (-) 366 WP_011064000.1 twitching motility response regulator PilH -
  WIN67_RS28890 (WIN67_28890) pilG 6380473..6380877 (-) 405 WP_025131048.1 twitching motility response regulator PilG Regulator
  WIN67_RS28895 (WIN67_28895) gshB 6381114..6382085 (+) 972 WP_102881162.1 glutathione synthase -
  WIN67_RS28900 (WIN67_28900) - 6382216..6383115 (+) 900 WP_110594340.1 energy transducer TonB -
  WIN67_RS28905 (WIN67_28905) - 6383245..6383814 (+) 570 WP_339070366.1 YqgE/AlgH family protein -
  WIN67_RS28910 (WIN67_28910) ruvX 6383814..6384251 (+) 438 WP_016964942.1 Holliday junction resolvase RuvX -
  WIN67_RS28915 (WIN67_28915) pyrR 6384368..6384874 (+) 507 WP_273922834.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14766.31 Da        Isoelectric Point: 7.3848

>NTDB_id=960086 WIN67_RS28890 WP_025131048.1 6380473..6380877(-) (pilG) [Pseudomonas idahonensis strain BIM B-1906]
MEQHSNALKVMVIDDSKTIRRTAEMLLKNVGCEVITAVDGFEALSKIVDHHPGIIFVDIMMPRLDGYQTCALVKNHSAFK
SIPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPDFVALAPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=960086 WIN67_RS28890 WP_025131048.1 6380473..6380877(-) (pilG) [Pseudomonas idahonensis strain BIM B-1906]
ATGGAACAGCATTCCAACGCCTTGAAGGTGATGGTGATCGACGATTCGAAGACGATTCGCCGCACGGCCGAAATGCTGCT
GAAGAACGTCGGCTGTGAAGTCATTACCGCAGTGGACGGCTTCGAAGCGCTGTCGAAGATCGTCGACCACCACCCCGGAA
TCATTTTCGTCGACATCATGATGCCGCGGCTCGACGGTTATCAGACCTGTGCGCTGGTGAAGAACCACAGCGCGTTCAAG
TCCATTCCCGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGCTCCGACCAGTT
TTTGACCAAACCCTTCAGCAAGGAAGAACTGCTGAGCGCAATCAAGGCCCACGTTCCGGACTTTGTCGCGCTTGCGCCAC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709
  vicR Streptococcus mutans UA159

43.59

87.313

0.381