Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   WHL95_RS02095 Genome accession   NZ_CP149578
Coordinates   449656..450063 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa isolate FELIX_MS413     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 444656..455063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL95_RS02065 - 444704..445708 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  WHL95_RS02070 pyrR 445732..446244 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  WHL95_RS02075 ruvX 446356..446790 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  WHL95_RS02080 - 446790..447359 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  WHL95_RS02085 - 447408..448301 (-) 894 WP_003114892.1 energy transducer TonB -
  WHL95_RS02090 gshB 448448..449401 (-) 954 WP_003100943.1 glutathione synthase -
  WHL95_RS02095 pilG 449656..450063 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  WHL95_RS02100 pilH 450110..450475 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  WHL95_RS02105 - 450526..451062 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  WHL95_RS02110 pilJ 451147..453195 (+) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  WHL95_RS02115 pilK 453256..454131 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=960014 WHL95_RS02095 WP_003084583.1 449656..450063(+) (pilG) [Pseudomonas aeruginosa isolate FELIX_MS413]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=960014 WHL95_RS02095 WP_003084583.1 449656..450063(+) (pilG) [Pseudomonas aeruginosa isolate FELIX_MS413]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385