Detailed information NTG0959540

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3MI_RS05080
• Genome accession: NZ_CP173479
• Coordinates: 734066..735091 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 98223
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 729066..740091

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3MI_RS05050 (ACI3MI_05050)	zapB	729150..729395 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACI3MI_RS05055 (ACI3MI_05055)	rraA	729480..729965 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3MI_RS05060 (ACI3MI_05060)	menA	730058..730984 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3MI_RS05065 (ACI3MI_05065)	hslU	731051..732382 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACI3MI_RS05070 (ACI3MI_05070)	hslV	732392..732922 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3MI_RS05075 (ACI3MI_05075)	ftsN	733015..733974 (-)	960	WP_000068828.1	cell division protein FtsN	-
ACI3MI_RS05080 (ACI3MI_05080)	cytR	734066..735091 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3MI_RS05085 (ACI3MI_05085)	priA	735247..737445 (-)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
ACI3MI_RS05090 (ACI3MI_05090)	rpmE	737648..737860 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACI3MI_RS05095 (ACI3MI_05095)	-	737915..738538 (-)	624	WP_000720774.1	TIGR02117 family protein	-
ACI3MI_RS05100 (ACI3MI_05100)	yiiX	738545..739153 (-)	609	WP_106495437.1	YiiX family permuted papain-like enzyme	-
ACI3MI_RS05105 (ACI3MI_05105)	metJ	739337..739654 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=959540 ACI3MI_RS05080 WP_000644904.1 734066..735091(-) (cytR) [Escherichia coli strain 98223]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=959540 ACI3MI_RS05080 WP_000644904.1 734066..735091(-) (cytR) [Escherichia coli strain 98223]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628