Detailed information NTG0095913

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: AABA19_RS00235
• Genome accession: NZ_AP028609
• Coordinates: 40566..41459 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343891.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep4
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 35566..46459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA19_RS00195 (TKY121806_00330)	-	35879..37048 (+)	1170	WP_000366351.1	pyridoxal phosphate-dependent aminotransferase	-
AABA19_RS00200 (TKY121806_00340)	recO	37045..37815 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
AABA19_RS00205 (TKY121806_00350)	plsX	37812..38804 (+)	993	WP_000717461.1	phosphate acyltransferase PlsX	-
AABA19_RS00210 (TKY121806_00360)	-	38810..39043 (+)	234	WP_000136447.1	acyl carrier protein	-
AABA19_RS00215 (TKY121806_00370)	-	39080..39379 (+)	300	Protein_35	transposase family protein	-
AABA19_RS00220 (TKY121806_00380)	blpU	39582..39812 (+)	231	WP_001093075.1	bacteriocin-like peptide BlpU	-
AABA19_RS00225	-	39815..39940 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
AABA19_RS00230	-	40351..40545 (+)	195	WP_000756776.1	hypothetical protein	-
AABA19_RS00235 (TKY121806_00390)	comR	40566..41459 (+)	894	WP_000343891.1	helix-turn-helix domain-containing protein	Regulator
AABA19_RS00240 (TKY121806_00400)	-	42002..42298 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
AABA19_RS00245	-	42305..43441 (+)	1137	WP_000698828.1	hypothetical protein	-
AABA19_RS00250 (TKY121806_00410)	-	43438..43920 (+)	483	WP_001232094.1	stage II sporulation protein M	-
AABA19_RS00255 (TKY121806_00420)	-	43917..44513 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
AABA19_RS00260 (TKY121806_00430)	-	44494..44985 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34476.90 Da
• Isoelectric Point: 4.6063

>NTDB_id=95913 AABA19_RS00235 WP_000343891.1 40566..41459(+) (comR) [Streptococcus pneumoniae strain Sep4]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKDSLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNVAEAESFYEKAISLAELLDDQVLVQKILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=95913 AABA19_RS00235 WP_000343891.1 40566..41459(+) (comR) [Streptococcus pneumoniae strain Sep4]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGATAGCCTAGTTCAGATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGTTAAAGGCGAAATATGCTTTATTTGTAGATAAGAATGTGGCAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGATGATCAGGTATTAGTTCAGAAAATTTTAGCAGAAAAACAAATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37	100	0.374