Detailed information NTG0095903

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AABA07_RS10330
• Genome accession: NZ_AP028608
• Coordinates: 2021405..2022502 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266670.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2016405..2027502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA07_RS10305 (TKY120829_20010)	pgsA	2016926..2017471 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AABA07_RS10310 (TKY120829_20020)	rodZ	2017482..2018303 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
AABA07_RS10315 (TKY120829_20030)	-	2018345..2019628 (-)	1284	WP_000170213.1	pitrilysin family protein	-
AABA07_RS10320 (TKY120829_20040)	-	2019625..2020875 (-)	1251	WP_000424259.1	pitrilysin family protein	-
AABA07_RS10325 (TKY120829_20050)	yaaA	2021034..2021402 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
AABA07_RS10330 (TKY120829_20060)	recF	2021405..2022502 (+)	1098	WP_000266670.1	DNA replication/repair protein RecF	Machinery gene
AABA07_RS10335 (TKY120829_20070)	guaB	2022553..2024031 (-)	1479	WP_000073429.1	IMP dehydrogenase	-
AABA07_RS10340 (TKY120829_20080)	trpS	2024183..2025208 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
AABA07_RS10345 (TKY120829_20090)	-	2025414..2027036 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41927.06 Da
• Isoelectric Point: 9.3082

>NTDB_id=95903 AABA07_RS10330 WP_000266670.1 2021405..2022502(+) (recF) [Streptococcus pneumoniae strain Sep3]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSVQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQNGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=95903 AABA07_RS10330 WP_000266670.1 2021405..2022502(+) (recF) [Streptococcus pneumoniae strain Sep3]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAGCTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTATCTAAAATCAGTTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGAATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	46.175	100	0.463