Detailed information NTG0958570

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACI3L5_RS05520
• Genome accession: NZ_CP173389
• Coordinates: 1173337..1174617 (+)
• Length: 426 a.a.
• NCBI ID: WP_005430932.1
• Uniprot ID: A7MV82
• Organism: Vibrio campbellii strain LB10
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1168337..1179617

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3L5_RS05505 (ACI3L5_05505)	-	1168898..1170703 (-)	1806	WP_404973486.1	ATP-binding protein	-
ACI3L5_RS05510 (ACI3L5_05510)	tig	1171228..1172532 (+)	1305	WP_045397570.1	trigger factor	-
ACI3L5_RS05515 (ACI3L5_05515)	clpP	1172639..1173265 (+)	627	WP_005430931.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ACI3L5_RS05520 (ACI3L5_05520)	clpX	1173337..1174617 (+)	1281	WP_005430932.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
ACI3L5_RS05525 (ACI3L5_05525)	lon	1174748..1177099 (+)	2352	WP_005529911.1	endopeptidase La	-
ACI3L5_RS05530 (ACI3L5_05530)	-	1177291..1177563 (+)	273	WP_005430934.1	HU family DNA-binding protein	-

Sequence

Protein

• Length: 426 a.a.
• Molecular weight: 46694.22 Da
• Isoelectric Point: 4.5616

>NTDB_id=958570 ACI3L5_RS05520 WP_005430932.1 1173337..1174617(+) (clpX) [Vibrio campbellii strain LB10]
MTDKSKESGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKKESEALPTPKQIREHLDDYVI
GQDYAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDV
ENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
DTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNETKTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELD
EEALIQILCEPKNALTKQYAALFELEDAELEFREDALRAIAKKAMERKTGARGLRSILESVLLETMYELPSATDVSKVVI
DESVINGESEPLLIYSNADNQAAGAE

Nucleotide

• Length: 1281 bp

>NTDB_id=958570 ACI3L5_RS05520 WP_005430932.1 1173337..1174617(+) (clpX) [Vibrio campbellii strain LB10]
ATGACAGATAAAAGCAAAGAAAGTGGCAGCGGCAAATTGCTGTACTGCTCTTTCTGTGGCAAAAGTCAGCACGAAGTTCG
CAAGCTAATCGCAGGTCCGTCAGTTTACATTTGCGACGAGTGTGTCGACTTATGTAACGATATCATTCGCGAAGAAATCA
AGGATGTTCTCCCTAAGAAAGAATCTGAAGCGTTACCAACGCCAAAACAGATCCGTGAACACCTTGATGACTATGTGATC
GGACAAGATTACGCGAAAAAAGTGCTCGCAGTTGCGGTATATAACCACTACAAGCGTTTACGCAACGGTGATACAACGAG
CGAAGGTGTGGAACTTGGTAAAAGTAACATCCTTCTAATTGGTCCTACTGGTAGTGGTAAAACACTGCTTGCTGAGACGC
TAGCTCGATTCCTGGATGTGCCATTTACAATGGCTGACGCTACCACACTAACCGAAGCAGGTTACGTTGGTGAAGACGTT
GAAAACATCATCCAGAAGCTTCTGCAAAAATGTGATTACGATGTAGCGAAGGCTGAACGCGGCATTGTATACATTGACGA
AATTGACAAAATTTCTCGTAAAGCTGAAAACCCATCAATTACGCGCGACGTATCTGGTGAAGGTGTTCAGCAGGCGCTAC
TAAAACTTATCGAAGGTACGGTTGCATCAGTTCCGCCACAAGGTGGTCGTAAGCATCCGCAGCAAGAATTCCTACAAGTG
GACACGTCTAAGATCCTGTTCATCTGTGGTGGTGCATTTGCTGGCCTAGATAAAGTGATTGAACAGCGTGTAGCGACAGG
CACAGGTATTGGTTTTGGCGCAGAAGTGCGCTCTAAGAACGAAACCAAAACAGTCGGTGAACTATTTACTCAGGTAGAGC
CTGAAGATCTAGTGAAATACGGTCTGATTCCTGAGTTCATCGGTCGTCTACCAGTAACAACAACACTGACTGAGCTTGAT
GAAGAAGCGTTAATTCAGATCCTATGTGAACCGAAGAACGCACTGACCAAGCAATACGCAGCATTGTTCGAGCTAGAAGA
CGCTGAACTTGAGTTCCGTGAAGACGCGTTACGTGCTATCGCTAAAAAAGCGATGGAGCGTAAAACGGGTGCTCGTGGTC
TACGCTCAATCTTAGAAAGCGTTCTGCTAGAAACCATGTATGAACTGCCATCAGCGACGGACGTAAGTAAAGTCGTGATT
GATGAATCAGTAATTAACGGTGAATCAGAACCATTGCTCATTTACAGCAACGCCGACAATCAGGCCGCTGGAGCAGAATA
A

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (14-51)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (319-396)

3D structure

• AlphaFold DB: A7MV82

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	58.853	94.131	0.554
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.321	95.07	0.516