Detailed information NTG0958442

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACI3L9_RS13115
• Genome accession: NZ_CP173385
• Coordinates: 2860172..2861452 (+)
• Length: 426 a.a.
• NCBI ID: WP_005430932.1
• Uniprot ID: A7MV82
• Organism: Vibrio campbellii strain LB198
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2855172..2866452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3L9_RS13100 (ACI3L9_13100)	-	2855733..2857538 (-)	1806	WP_079401105.1	ATP-binding protein	-
ACI3L9_RS13105 (ACI3L9_13105)	tig	2858063..2859367 (+)	1305	WP_045397570.1	trigger factor	-
ACI3L9_RS13110 (ACI3L9_13110)	clpP	2859474..2860100 (+)	627	WP_005430931.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ACI3L9_RS13115 (ACI3L9_13115)	clpX	2860172..2861452 (+)	1281	WP_005430932.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
ACI3L9_RS13120 (ACI3L9_13120)	lon	2861583..2863934 (+)	2352	WP_005529911.1	endopeptidase La	-
ACI3L9_RS13125 (ACI3L9_13125)	-	2864126..2864398 (+)	273	WP_005430934.1	HU family DNA-binding protein	-

Sequence

Protein

• Length: 426 a.a.
• Molecular weight: 46694.22 Da
• Isoelectric Point: 4.5616

>NTDB_id=958442 ACI3L9_RS13115 WP_005430932.1 2860172..2861452(+) (clpX) [Vibrio campbellii strain LB198]
MTDKSKESGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKKESEALPTPKQIREHLDDYVI
GQDYAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDV
ENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
DTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNETKTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELD
EEALIQILCEPKNALTKQYAALFELEDAELEFREDALRAIAKKAMERKTGARGLRSILESVLLETMYELPSATDVSKVVI
DESVINGESEPLLIYSNADNQAAGAE

Nucleotide

• Length: 1281 bp

>NTDB_id=958442 ACI3L9_RS13115 WP_005430932.1 2860172..2861452(+) (clpX) [Vibrio campbellii strain LB198]
ATGACAGATAAAAGCAAAGAAAGTGGCAGCGGCAAATTGCTGTACTGCTCTTTCTGTGGCAAAAGTCAGCACGAAGTTCG
CAAGCTAATCGCAGGTCCGTCAGTTTACATTTGCGACGAGTGTGTCGACTTATGTAACGATATCATTCGCGAAGAAATCA
AGGATGTTCTCCCTAAGAAAGAATCTGAAGCGTTACCAACGCCAAAACAGATCCGTGAACACCTTGATGACTATGTGATC
GGACAAGATTACGCGAAAAAAGTGCTCGCAGTTGCGGTATATAACCACTACAAGCGTTTACGCAACGGTGATACAACGAG
CGAAGGTGTGGAACTTGGTAAAAGTAACATCCTTCTAATTGGTCCTACTGGTAGTGGTAAAACACTGCTTGCTGAGACGC
TAGCTCGATTCCTGGATGTGCCATTTACAATGGCTGACGCTACCACACTAACCGAAGCAGGTTACGTTGGTGAAGACGTT
GAAAACATCATCCAGAAGCTTCTGCAAAAATGTGATTACGATGTAGCGAAGGCTGAACGCGGCATTGTATACATTGACGA
AATTGACAAAATTTCTCGTAAAGCTGAAAACCCATCAATTACGCGCGACGTATCTGGTGAAGGTGTTCAGCAGGCGCTAC
TAAAACTTATCGAAGGTACGGTTGCATCAGTTCCGCCACAAGGTGGTCGTAAGCATCCGCAGCAAGAATTCCTACAAGTG
GACACGTCTAAGATCCTGTTCATCTGTGGTGGTGCATTTGCTGGCCTAGATAAAGTGATTGAACAGCGTGTAGCGACAGG
CACAGGTATTGGTTTTGGCGCAGAAGTGCGCTCTAAGAACGAAACCAAAACAGTCGGTGAACTATTTACTCAGGTAGAGC
CTGAAGATCTAGTGAAATACGGTCTGATTCCTGAGTTCATCGGTCGTCTACCAGTAACAACAACACTGACTGAGCTTGAT
GAAGAAGCGTTAATTCAGATCCTATGTGAACCGAAGAACGCACTGACCAAGCAATACGCAGCATTGTTCGAGCTAGAAGA
CGCTGAACTTGAGTTCCGTGAAGACGCGTTACGTGCTATCGCTAAGAAAGCGATGGAGCGTAAAACGGGTGCTCGTGGTC
TACGCTCAATCTTAGAAAGCGTTCTGCTAGAAACCATGTATGAACTGCCATCAGCGACGGACGTAAGTAAAGTCGTGATT
GATGAATCAGTGATTAACGGTGAATCAGAACCATTGCTCATTTACAGCAACGCCGACAATCAGGCCGCTGGAGCAGAATA
A

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (14-51)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (319-396)

3D structure

• AlphaFold DB: A7MV82

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	58.853	94.131	0.554
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.321	95.07	0.516