Detailed information NTG0095787

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AABA14_RS11080
• Genome accession: NZ_AP028607
• Coordinates: 2127292..2128389 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain Sep2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2122292..2133389

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA14_RS11055 (TKY123642_21400)	pgsA	2122813..2123358 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AABA14_RS11060 (TKY123642_21410)	rodZ	2123369..2124190 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
AABA14_RS11065 (TKY123642_21420)	-	2124232..2125515 (-)	1284	WP_000170202.1	pitrilysin family protein	-
AABA14_RS11070 (TKY123642_21430)	-	2125512..2126762 (-)	1251	WP_000424271.1	pitrilysin family protein	-
AABA14_RS11075 (TKY123642_21440)	yaaA	2126921..2127289 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
AABA14_RS11080 (TKY123642_21450)	recF	2127292..2128389 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
AABA14_RS11085 (TKY123642_21460)	guaB	2128440..2129918 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
AABA14_RS11090 (TKY123642_21470)	trpS	2130071..2131096 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
AABA14_RS11095 (TKY123642_21480)	-	2131302..2132924 (+)	1623	WP_000958769.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=95787 AABA14_RS11080 WP_000266660.1 2127292..2128389(+) (recF) [Streptococcus pneumoniae strain Sep2]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=95787 AABA14_RS11080 WP_000266660.1 2127292..2128389(+) (recF) [Streptococcus pneumoniae strain Sep2]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46