Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACIC53_RS00775 Genome accession   NZ_CP173219
Coordinates   156095..156502 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain HN41     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 151095..161502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIC53_RS00745 (ACIC53_00745) - 151143..152147 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  ACIC53_RS00750 (ACIC53_00750) pyrR 152171..152683 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACIC53_RS00755 (ACIC53_00755) ruvX 152795..153229 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  ACIC53_RS00760 (ACIC53_00760) - 153229..153798 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  ACIC53_RS00765 (ACIC53_00765) - 153847..154740 (-) 894 WP_003084580.1 TonB family protein -
  ACIC53_RS00770 (ACIC53_00770) gshB 154887..155840 (-) 954 WP_003100943.1 glutathione synthase -
  ACIC53_RS00775 (ACIC53_00775) pilG 156095..156502 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  ACIC53_RS00780 (ACIC53_00780) pilH 156549..156914 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  ACIC53_RS00785 (ACIC53_00785) - 156965..157501 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  ACIC53_RS00790 (ACIC53_00790) pilJ 157586..159634 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  ACIC53_RS00795 (ACIC53_00795) pilK 159695..160570 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=957084 ACIC53_RS00775 WP_003084583.1 156095..156502(+) (pilG) [Pseudomonas aeruginosa strain HN41]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=957084 ACIC53_RS00775 WP_003084583.1 156095..156502(+) (pilG) [Pseudomonas aeruginosa strain HN41]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385