Detailed information NTG0095675

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: AABA14_RS00490
• Genome accession: NZ_AP028607
• Coordinates: 77178..78071 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep2
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 72178..83071

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA14_RS00450 (TKY123642_00820)	-	72491..73660 (+)	1170	WP_000366342.1	pyridoxal phosphate-dependent aminotransferase	-
AABA14_RS00455 (TKY123642_00830)	recO	73657..74427 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
AABA14_RS00460 (TKY123642_00840)	plsX	74424..75416 (+)	993	WP_000717458.1	phosphate acyltransferase PlsX	-
AABA14_RS00465 (TKY123642_00850)	-	75422..75655 (+)	234	WP_000136447.1	acyl carrier protein	-
AABA14_RS00470 (TKY123642_00860)	-	75701..75991 (+)	291	Protein_86	IS5/IS1182 family transposase	-
AABA14_RS00475 (TKY123642_00870)	blpU	76194..76424 (+)	231	WP_001093075.1	bacteriocin-like peptide BlpU	-
AABA14_RS00480	-	76427..76552 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
AABA14_RS00485	-	76963..77157 (+)	195	WP_000756776.1	hypothetical protein	-
AABA14_RS00490 (TKY123642_00880)	comR	77178..78071 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
AABA14_RS00495 (TKY123642_00890)	-	78614..78910 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
AABA14_RS00500	-	78917..80053 (+)	1137	WP_000698828.1	hypothetical protein	-
AABA14_RS00505 (TKY123642_00900)	-	80050..80532 (+)	483	WP_001232094.1	stage II sporulation protein M	-
AABA14_RS00510 (TKY123642_00910)	-	80529..81125 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
AABA14_RS00515 (TKY123642_00920)	-	81106..81597 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=95675 AABA14_RS00490 WP_000343888.1 77178..78071(+) (comR) [Streptococcus pneumoniae strain Sep2]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=95675 AABA14_RS00490 WP_000343888.1 77178..78071(+) (comR) [Streptococcus pneumoniae strain Sep2]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37