Detailed information NTG0095664

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AAA996_RS10740
• Genome accession: NZ_AP028606
• Coordinates: 2087843..2088940 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266670.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2082843..2093940

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA996_RS10715 (TKY121773_20700)	pgsA	2083364..2083909 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AAA996_RS10720 (TKY121773_20710)	rodZ	2083920..2084741 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
AAA996_RS10725 (TKY121773_20720)	-	2084783..2086066 (-)	1284	WP_000170213.1	pitrilysin family protein	-
AAA996_RS10730 (TKY121773_20730)	-	2086063..2087313 (-)	1251	WP_000424259.1	pitrilysin family protein	-
AAA996_RS10735 (TKY121773_20740)	yaaA	2087472..2087840 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
AAA996_RS10740 (TKY121773_20750)	recF	2087843..2088940 (+)	1098	WP_000266670.1	DNA replication/repair protein RecF	Machinery gene
AAA996_RS10745 (TKY121773_20760)	guaB	2088991..2090469 (-)	1479	WP_000073429.1	IMP dehydrogenase	-
AAA996_RS10750 (TKY121773_20770)	trpS	2090621..2091646 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
AAA996_RS10755 (TKY121773_20780)	-	2091852..2093474 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41927.06 Da
• Isoelectric Point: 9.3082

>NTDB_id=95664 AAA996_RS10740 WP_000266670.1 2087843..2088940(+) (recF) [Streptococcus pneumoniae strain Sep1]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSVQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQNGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=95664 AAA996_RS10740 WP_000266670.1 2087843..2088940(+) (recF) [Streptococcus pneumoniae strain Sep1]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAGCTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTATCTAAAATCAGTTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGAATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	46.175	100	0.463