Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ACF2JY_RS04005 Genome accession   NZ_CP172966
Coordinates   793061..793924 (+) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain cel     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 788061..798924
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF2JY_RS03975 (ACF2JY_03975) pncA 788525..789076 (+) 552 WP_014477836.1 cysteine hydrolase family protein -
  ACF2JY_RS03980 (ACF2JY_03980) pncB 789092..790564 (+) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ACF2JY_RS03985 (ACF2JY_03985) pdeH 790701..791930 (+) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  ACF2JY_RS03990 (ACF2JY_03990) - 791906..792274 (-) 369 WP_046381300.1 hypothetical protein -
  ACF2JY_RS03995 (ACF2JY_03995) - 792389..792514 (-) 126 WP_003228793.1 hypothetical protein -
  ACF2JY_RS04000 (ACF2JY_04000) degQ 792736..792876 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ACF2JY_RS04005 (ACF2JY_04005) comQ 793061..793924 (+) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  ACF2JY_RS04010 (ACF2JY_04010) comX 793926..794147 (+) 222 WP_014480704.1 competence pheromone ComX -
  ACF2JY_RS04015 (ACF2JY_04015) comP 794163..796475 (+) 2313 WP_041332996.1 sensor histidine kinase Regulator
  ACF2JY_RS04020 (ACF2JY_04020) comA 796556..797200 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ACF2JY_RS04025 (ACF2JY_04025) yuxO 797219..797599 (+) 381 WP_014477831.1 hotdog fold thioesterase -
  ACF2JY_RS04030 (ACF2JY_04030) mnhG 797640..798014 (-) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  ACF2JY_RS04035 (ACF2JY_04035) mrpF 797998..798282 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ACF2JY_RS04040 (ACF2JY_04040) mrpE 798282..798758 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=956080 ACF2JY_RS04005 WP_014480705.1 793061..793924(+) (comQ) [Bacillus subtilis strain cel]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=956080 ACF2JY_RS04005 WP_014480705.1 793061..793924(+) (comQ) [Bacillus subtilis strain cel]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439