Detailed information NTG0956037

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: ACIJUN_RS22350
• Genome accession: NZ_CP172962
• Coordinates: 4795110..4796135 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain YB1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4790110..4801135

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIJUN_RS22325 (ACIJUN_22330)	-	4790298..4790615 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
ACIJUN_RS22330 (ACIJUN_22335)	trkA	4790764..4792137 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
ACIJUN_RS22335 (ACIJUN_22340)	rsmB	4792165..4793469 (-)	1305	WP_003118477.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
ACIJUN_RS22340 (ACIJUN_22345)	fmt	4793466..4794410 (-)	945	WP_003107057.1	methionyl-tRNA formyltransferase	-
ACIJUN_RS22345 (ACIJUN_22350)	def	4794465..4794971 (-)	507	WP_003107059.1	peptide deformylase	-
ACIJUN_RS22350 (ACIJUN_22355)	tsaP	4795110..4796135 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
ACIJUN_RS22355 (ACIJUN_22360)	dprA	4796270..4797358 (+)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
ACIJUN_RS22360 (ACIJUN_22365)	-	4797399..4797956 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
ACIJUN_RS22365 (ACIJUN_22370)	-	4797966..4798943 (-)	978	WP_003111202.1	NADPH:quinone reductase	-
ACIJUN_RS22370 (ACIJUN_22375)	hemF	4799134..4800051 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
ACIJUN_RS22375 (ACIJUN_22380)	aroE	4800109..4800933 (+)	825	WP_003111201.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=956037 ACIJUN_RS22350 WP_003097294.1 4795110..4796135(+) (tsaP) [Pseudomonas aeruginosa strain YB1]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=956037 ACIJUN_RS22350 WP_003097294.1 4795110..4796135(+) (tsaP) [Pseudomonas aeruginosa strain YB1]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393