Detailed information    

insolico Bioinformatically predicted

Overview


Name   mutX   Type   Machinery gene
Locus tag   AAA996_RS05045 Genome accession   NZ_AP028606
Coordinates   988913..989377 (+) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus pneumoniae strain Sep1     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 983913..994377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAA996_RS05020 - 985828..985902 (+) 75 Protein_993 dihydroxyacetone kinase subunit L -
  AAA996_RS05025 (TKY121773_10010) dhaM 985902..986282 (+) 381 WP_000443784.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  AAA996_RS05030 (TKY121773_10020) - 986741..987454 (+) 714 WP_000499431.1 YjjG family noncanonical pyrimidine nucleotidase -
  AAA996_RS05035 (TKY121773_10030) - 987512..988114 (+) 603 WP_001810555.1 hypothetical protein -
  AAA996_RS05040 (TKY121773_10040) - 988250..988903 (+) 654 WP_000401326.1 uracil-DNA glycosylase -
  AAA996_RS05045 (TKY121773_10050) mutX 988913..989377 (+) 465 WP_001135768.1 8-oxo-dGTP diphosphatase Machinery gene
  AAA996_RS05050 (TKY121773_10060) - 989390..990658 (+) 1269 WP_000924495.1 dihydroorotase -
  AAA996_RS05055 (TKY121773_10070) - 990672..990932 (+) 261 WP_001105925.1 hypothetical protein -
  AAA996_RS05060 (TKY121773_10080) pdrM 990943..992304 (+) 1362 WP_000278537.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  AAA996_RS05065 (TKY121773_10090) - 992458..993426 (+) 969 WP_000105363.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=95596 AAA996_RS05045 WP_001135768.1 988913..989377(+) (mutX) [Streptococcus pneumoniae strain Sep1]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=95596 AAA996_RS05045 WP_001135768.1 988913..989377(+) (mutX) [Streptococcus pneumoniae strain Sep1]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGACGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAATGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains


Predicted by InterProScan.

(2-127)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987


Multiple sequence alignment