Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   ACF1RT_RS05855 Genome accession   NZ_CP172847
Coordinates   1154864..1155298 (-) Length   144 a.a.
NCBI ID   WP_002263292.1    Uniprot ID   Q8DUK6
Organism   Streptococcus mutans strain DPC6143     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1149864..1160298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF1RT_RS05840 (ACF1RT_05840) - 1150033..1150641 (-) 609 WP_226711187.1 hypothetical protein -
  ACF1RT_RS05845 (ACF1RT_05845) rcrQ 1151314..1153068 (-) 1755 WP_226716855.1 ABC transporter transmembrane domain-containing protein Regulator
  ACF1RT_RS05850 (ACF1RT_05850) rcrP 1153058..1154860 (-) 1803 WP_002266459.1 ABC transporter ATP-binding protein Regulator
  ACF1RT_RS05855 (ACF1RT_05855) rcrR 1154864..1155298 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ACF1RT_RS05860 (ACF1RT_05860) queC 1155851..1156504 (+) 654 WP_002269531.1 7-cyano-7-deazaguanine synthase QueC -
  ACF1RT_RS05865 (ACF1RT_05865) queD 1156504..1156950 (+) 447 WP_002266457.1 6-carboxytetrahydropterin synthase QueD -
  ACF1RT_RS05870 (ACF1RT_05870) queE 1156947..1157663 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  ACF1RT_RS05875 (ACF1RT_05875) queF 1157676..1158164 (+) 489 WP_002263288.1 preQ(1) synthase -
  ACF1RT_RS05880 (ACF1RT_05880) - 1158273..1158668 (+) 396 WP_400260296.1 DUF3021 family protein -
  ACF1RT_RS05885 (ACF1RT_05885) gdhA 1158780..1160129 (-) 1350 WP_002263849.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16720.58 Da        Isoelectric Point: 10.5126

>NTDB_id=954428 ACF1RT_RS05855 WP_002263292.1 1154864..1155298(-) (rcrR) [Streptococcus mutans strain DPC6143]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=954428 ACF1RT_RS05855 WP_002263292.1 1154864..1155298(-) (rcrR) [Streptococcus mutans strain DPC6143]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGAAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(31-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

100

100

1