Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACF1RT_RS05850 Genome accession   NZ_CP172847
Coordinates   1153058..1154860 (-) Length   600 a.a.
NCBI ID   WP_002266459.1    Uniprot ID   -
Organism   Streptococcus mutans strain DPC6143     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1148058..1159860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF1RT_RS05830 (ACF1RT_05830) - 1149083..1149697 (-) 615 WP_226711184.1 hypothetical protein -
  ACF1RT_RS05835 (ACF1RT_05835) - 1149806..1150042 (-) 237 WP_226711185.1 hypothetical protein -
  ACF1RT_RS05840 (ACF1RT_05840) - 1150033..1150641 (-) 609 WP_226711187.1 hypothetical protein -
  ACF1RT_RS05845 (ACF1RT_05845) rcrQ 1151314..1153068 (-) 1755 WP_226716855.1 ABC transporter transmembrane domain-containing protein Regulator
  ACF1RT_RS05850 (ACF1RT_05850) rcrP 1153058..1154860 (-) 1803 WP_002266459.1 ABC transporter ATP-binding protein Regulator
  ACF1RT_RS05855 (ACF1RT_05855) rcrR 1154864..1155298 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ACF1RT_RS05860 (ACF1RT_05860) queC 1155851..1156504 (+) 654 WP_002269531.1 7-cyano-7-deazaguanine synthase QueC -
  ACF1RT_RS05865 (ACF1RT_05865) queD 1156504..1156950 (+) 447 WP_002266457.1 6-carboxytetrahydropterin synthase QueD -
  ACF1RT_RS05870 (ACF1RT_05870) queE 1156947..1157663 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  ACF1RT_RS05875 (ACF1RT_05875) queF 1157676..1158164 (+) 489 WP_002263288.1 preQ(1) synthase -
  ACF1RT_RS05880 (ACF1RT_05880) - 1158273..1158668 (+) 396 WP_400260296.1 DUF3021 family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66940.75 Da        Isoelectric Point: 9.6552

>NTDB_id=954427 ACF1RT_RS05850 WP_002266459.1 1153058..1154860(-) (rcrP) [Streptococcus mutans strain DPC6143]
MFKIFKRLNAKEWGMVLLSTAFICLAVWMDLKTPEYMSNITTLLQTKGTTASDIMDPGSKMLMFSFGSFFMAVLVGFLAS
RTAASFTTRLRSDIFNRVMDYSEAEIKKFSIPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAVWALTKIWGKSDEWTGA
VGVAVLIVFIMLSVLMFVAFPRQRQVQSLTDALNSTTRESLTGVRVVRAYNAEDYQDTKFKRENKNLTKLNLLVYRLMSL
MNPVMTVVSSGLTLAIYWIGAYLLNDIKIPMTSVTAAKGAIADRISVFSDMVVFSSYAMQVVVGFMMMVAIFIILPRALV
SAKRINEVLALNSSVHFKEYSKADNARKGEVEFHDVSFRYSKNSRAVIEHVSFSAKAGETVAFIGSTGSGKSTLVNLIPR
FYDATEGWIKIDGIKVQDYSHDDLNNKVGYIPQKAVLFSGTIRSNIAFGQSDQAPLDDAKIWEALELAQAKNFVEEKEKG
LDTEVAQGGTNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILRNDLAKKTKEMTKLIVAQRISTIMDADHIL
VLDQGKVVGQGTHKELLANNDIYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=954427 ACF1RT_RS05850 WP_002266459.1 1153058..1154860(-) (rcrP) [Streptococcus mutans strain DPC6143]
ATGTTTAAAATTTTTAAACGTCTAAATGCTAAAGAATGGGGCATGGTTCTCCTTAGTACTGCCTTTATCTGTTTGGCTGT
CTGGATGGATTTGAAGACGCCCGAATATATGTCCAACATTACAACCTTGCTGCAGACTAAGGGAACGACCGCCTCAGATA
TTATGGATCCGGGATCTAAGATGCTCATGTTTTCATTTGGGAGCTTTTTTATGGCCGTTCTAGTTGGTTTTTTAGCTTCA
AGAACAGCTGCTAGCTTTACGACCCGTCTTCGATCTGATATTTTCAATCGGGTTATGGATTATTCAGAGGCGGAAATCAA
GAAATTTTCCATTCCCAGCCTTCTAACGCGTACGACTAATGATTTGACACAGTTGCAAATCATGATCGTTATGGGAATGC
AAGTGGTGACACGCGGTCCAATCATGGCTGTTTGGGCCTTGACTAAAATCTGGGGTAAAAGCGATGAATGGACAGGAGCA
GTCGGTGTTGCCGTTTTAATTGTCTTTATTATGCTGTCTGTTTTGATGTTTGTCGCTTTTCCAAGACAGCGTCAGGTGCA
GAGCTTGACGGATGCTCTAAATTCTACAACCCGTGAATCTCTGACTGGTGTTCGTGTTGTTCGGGCTTACAATGCAGAAG
ATTATCAGGACACTAAATTTAAGCGGGAAAATAAAAACCTGACGAAATTGAATTTATTGGTCTATCGTCTGATGTCTCTA
ATGAATCCTGTCATGACAGTTGTTTCCAGTGGTCTAACTTTAGCTATTTATTGGATTGGAGCTTACCTGCTCAATGATAT
TAAAATTCCTATGACGAGTGTGACAGCTGCTAAAGGAGCTATTGCTGATCGTATCAGTGTTTTTAGTGATATGGTTGTCT
TTTCATCTTATGCCATGCAGGTTGTTGTCGGTTTTATGATGATGGTCGCTATCTTTATCATTTTACCGCGTGCTTTAGTT
TCTGCCAAACGAATTAATGAAGTATTGGCGCTTAACTCATCTGTACACTTCAAAGAATATTCTAAAGCAGACAATGCTCG
AAAAGGAGAAGTCGAATTTCATGATGTATCGTTTCGTTACAGTAAAAATTCTCGTGCGGTTATTGAGCATGTGTCTTTCA
GTGCTAAAGCTGGTGAGACAGTTGCTTTTATTGGTTCCACTGGCTCAGGAAAATCAACTCTTGTTAATCTGATTCCTCGT
TTTTATGATGCTACAGAAGGTTGGATTAAGATAGATGGAATCAAAGTGCAAGATTACAGCCATGATGACCTCAACAATAA
AGTCGGCTATATTCCGCAAAAGGCAGTGCTTTTTAGTGGGACCATTCGTTCTAACATTGCATTTGGGCAAAGCGATCAAG
CACCGCTTGATGATGCTAAAATTTGGGAGGCTCTTGAACTAGCCCAAGCCAAAAACTTTGTTGAAGAAAAAGAAAAGGGT
CTGGATACCGAGGTAGCTCAAGGCGGTACCAACTTCTCTGGCGGTCAAAAGCAGCGCTTAGCTATTGCCCGTGCACTTGC
ACGCAAACCAGAAATTCTTATTTTTGATGACTCCTTCTCAGCTCTTGATTATAAGACGGATCGCATTCTGCGAAATGATT
TGGCAAAGAAAACCAAAGAAATGACTAAGTTGATTGTCGCCCAACGTATTTCAACTATTATGGATGCTGATCATATTTTA
GTCTTAGATCAAGGAAAGGTTGTTGGTCAAGGAACACACAAGGAATTACTGGCTAATAACGATATTTATCAAGAAATTGC
TTATTCACAACTATCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(369-518)

ABC transporter transmembrane region (ABC_membrane)

(17-266)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

99.833

100

0.998