Detailed information NTG0953989

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACGH7X_RS13405
• Genome accession: NZ_CP172448
• Coordinates: 2961988..2963274 (-)
• Length: 428 a.a.
• NCBI ID: WP_217169954.1
• Uniprot ID: -
• Organism: Streptomyces sp. BBFR51
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2956988..2968274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGH7X_RS13395 (ACGH7X_13395)	-	2958123..2960774 (-)	2652	WP_399884991.1	valine--tRNA ligase	-
ACGH7X_RS13400 (ACGH7X_13400)	-	2960911..2961918 (+)	1008	WP_399884993.1	hypothetical protein	-
ACGH7X_RS13405 (ACGH7X_13405)	clpX	2961988..2963274 (-)	1287	WP_217169954.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACGH7X_RS13410 (ACGH7X_13410)	clpP	2963466..2964179 (-)	714	WP_399884995.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACGH7X_RS13415 (ACGH7X_13415)	clpP	2964260..2964865 (-)	606	WP_393801497.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACGH7X_RS13420 (ACGH7X_13420)	tig	2965162..2966583 (-)	1422	WP_399884997.1	trigger factor	-
ACGH7X_RS13435 (ACGH7X_13435)	-	2967239..2967433 (-)	195	WP_217169938.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46827.60 Da
• Isoelectric Point: 4.7389

>NTDB_id=953989 ACGH7X_RS13405 WP_217169954.1 2961988..2963274(-) (clpX) [Streptomyces sp. BBFR51]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGAQGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIEGRAGAKGIGFGATIRSKREIESKDQFEQVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=953989 ACGH7X_RS13405 WP_217169954.1 2961988..2963274(-) (clpX) [Streptomyces sp. BBFR51]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTGGCCGAGACCA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTCGGCCAGGAGTCG
GCCAAGAAGGCCCTCTCCGTCGCGGTCTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCCCAAGGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTCCCCTTCGCCATCGCCGACGCCACCGCGCTCACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGAGGAAGAGCGAGAACCCCTCCATCACCCGCGACGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAGGGCACCACCGCCTCCGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCTCGGGCCTGGAGAAGATCATCGAGGGCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATCGAGTCCAAGGACCAGTTCGAGCAGGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCATCACCTCGGTGCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCCTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTCTCCAACGTCAACCCGACGCTGATCCCCAGGGATTCGCGGGGCCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.779	94.159	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521