Detailed information NTG0953881

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACGH52_RS05785
• Genome accession: NZ_CP172447
• Coordinates: 1311238..1312260 (+)
• Length: 340 a.a.
• NCBI ID: WP_399938021.1
• Uniprot ID: -
• Organism: Streptomyces sp. BBFR25
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1306238..1317260

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGH52_RS05770 (ACGH52_05770)	-	1307784..1308665 (-)	882	WP_076973134.1	carbohydrate ABC transporter permease	-
ACGH52_RS05775 (ACGH52_05775)	-	1308668..1309603 (-)	936	WP_059297437.1	carbohydrate ABC transporter permease	-
ACGH52_RS05780 (ACGH52_05780)	-	1309600..1310961 (-)	1362	WP_399938019.1	ABC transporter substrate-binding protein	-
ACGH52_RS05785 (ACGH52_05785)	cytR	1311238..1312260 (+)	1023	WP_399938021.1	LacI family DNA-binding transcriptional regulator	Regulator
ACGH52_RS05790 (ACGH52_05790)	-	1312425..1313597 (+)	1173	WP_399946646.1	MFS transporter	-
ACGH52_RS05795 (ACGH52_05795)	-	1313677..1314417 (+)	741	WP_121702964.1	maleylpyruvate isomerase family mycothiol-dependent enzyme	-
ACGH52_RS05800 (ACGH52_05800)	-	1314436..1314831 (-)	396	WP_121702965.1	MarR family winged helix-turn-helix transcriptional regulator	-
ACGH52_RS05805 (ACGH52_05805)	-	1314908..1315192 (+)	285	WP_121702966.1	DUF6332 family protein	-
ACGH52_RS05810 (ACGH52_05810)	vraR	1315153..1315818 (-)	666	WP_121702967.1	response regulator transcription factor	Regulator
ACGH52_RS05815 (ACGH52_05815)	-	1315850..1317079 (-)	1230	WP_076973403.1	sensor histidine kinase	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 36773.88 Da
• Isoelectric Point: 6.5944

>NTDB_id=953881 ACGH52_RS05785 WP_399938021.1 1311238..1312260(+) (cytR) [Streptomyces sp. BBFR25]
MAGSTLRDVARRAGVSIRTVSNVVNGSVPVSDELRVRVQAALDELDYRPNLVARNLRRGRSGMIALVVPELDVPYFAELA
REVITAARTHGYVVMLDQTDGDGDRERELLGRESRATMFDGLLLSPLSISADELRRRTNRVPVVLLGEHIFNGSFHHVAI
DNIVAAREATEHLIGLGRRRIAAIGDQPYSTGETAQLRTTGYRQALERAGLTVDEELIVPTPRFHRHLGAEAMERLLALP
EPPDAVFCYNDLLAIGAMHTLTRAGVRVPDDIAVVGVDGIQEGRYSSPSLTTVAPDKAAIARTAVSTLLGVIDGSAPAPT
ETKAPHRLLVRQSTVGAPVD

Nucleotide

• Length: 1023 bp

>NTDB_id=953881 ACGH52_RS05785 WP_399938021.1 1311238..1312260(+) (cytR) [Streptomyces sp. BBFR25]
ATGGCCGGCTCCACACTCCGCGACGTCGCCCGACGCGCCGGAGTCTCGATTCGCACCGTGTCCAACGTGGTCAACGGTTC
GGTGCCCGTCTCCGACGAGTTGCGGGTGCGGGTGCAGGCCGCGCTCGACGAACTCGACTACCGGCCGAACCTGGTGGCCC
GCAATCTCCGCCGGGGCCGCAGCGGCATGATCGCCCTGGTCGTCCCGGAGCTGGACGTGCCGTACTTCGCCGAACTGGCC
CGCGAGGTGATCACCGCGGCCCGCACCCACGGGTACGTGGTGATGCTCGACCAGACCGACGGCGACGGCGACCGCGAGCG
GGAGCTGCTGGGCCGCGAGTCCCGCGCCACGATGTTCGACGGCCTGCTGCTGAGCCCGCTGTCCATCTCCGCCGACGAGC
TGCGCCGGCGCACCAACAGGGTGCCCGTCGTGCTGCTCGGCGAGCACATCTTCAACGGCAGCTTCCACCACGTGGCGATC
GACAACATCGTCGCGGCCCGAGAGGCGACGGAGCACCTGATCGGCCTCGGCCGTCGGCGCATCGCGGCCATCGGCGACCA
GCCCTACAGCACCGGCGAGACCGCGCAGTTGCGGACGACGGGATACCGCCAGGCACTGGAACGGGCCGGTCTCACCGTCG
ACGAGGAGCTGATCGTCCCCACCCCGCGCTTCCACCGCCACCTCGGCGCCGAGGCCATGGAGCGCCTGCTCGCCCTGCCC
GAGCCGCCCGACGCGGTCTTCTGCTACAACGACCTGCTGGCCATCGGCGCCATGCACACCCTGACCCGGGCCGGTGTACG
GGTGCCCGACGACATCGCCGTCGTCGGGGTCGACGGCATCCAGGAGGGCCGGTACAGCTCGCCGTCGCTGACCACCGTCG
CCCCGGACAAGGCCGCGATCGCGCGCACGGCGGTCAGCACCCTGCTCGGCGTGATCGACGGTTCGGCGCCCGCGCCGACG
GAGACCAAGGCGCCGCACCGGCTGCTGGTGCGGCAGAGCACGGTGGGGGCACCGGTCGACTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (170-334)

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	39.365	92.647	0.365
cytR	Vibrio cholerae C6706	39.048	92.647	0.362