Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACHGMI_RS24810 Genome accession   NZ_CP172417
Coordinates   4548028..4548822 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain AKPS2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4543028..4553822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHGMI_RS24790 walR 4543270..4543977 (+) 708 WP_033880452.1 cell wall metabolism DNA-binding response regulator WalR -
  ACHGMI_RS24795 walK 4543985..4545820 (+) 1836 WP_017695786.1 cell wall metabolism sensor histidine kinase WalK -
  ACHGMI_RS24800 walH 4545810..4547177 (+) 1368 WP_026113653.1 WalRK two-component regulatory system regulator WalH -
  ACHGMI_RS24805 walI 4547164..4548006 (+) 843 WP_017695784.1 WalRK two-component regulatory system regulator WalI -
  ACHGMI_RS24810 vicX 4548028..4548822 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  ACHGMI_RS24815 htrA 4548904..4550106 (+) 1203 WP_017695783.1 serine protease HtrC Regulator
  ACHGMI_RS24820 - 4550126..4550256 (+) 131 Protein_4839 hypothetical protein -
  ACHGMI_RS24825 - 4550284..4550436 (+) 153 Protein_4840 ATP-binding protein -
  ACHGMI_RS24830 rocR 4550418..4551803 (-) 1386 WP_017695782.1 arginine utilization regulatory protein RocR -
  ACHGMI_RS24835 rocD 4552041..4553246 (+) 1206 WP_017695781.1 ornithine aminotransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=953781 ACHGMI_RS24810 WP_003226939.1 4548028..4548822(+) (vicX) [Bacillus subtilis strain AKPS2]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=953781 ACHGMI_RS24810 WP_003226939.1 4548028..4548822(+) (vicX) [Bacillus subtilis strain AKPS2]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTAATGGCACAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGTCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATTGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAATCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATATGACACCGATCCGAAGAAGGCCACTCCGCTTTGTGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53