Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP50_RS05205 | Genome accession | NZ_CP148264 |
| Coordinates | 1004928..1005230 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain Z1322HCJ0003 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 999928..1010230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP50_RS05180 (WHP50_05180) | rpsR | 1000291..1000551 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP50_RS05185 (WHP50_05185) | lon | 1000611..1002986 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHP50_RS05190 (WHP50_05190) | - | 1003003..1003650 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP50_RS05195 (WHP50_05195) | fliW | 1003811..1004200 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP50_RS05200 (WHP50_05200) | proC | 1004200..1004931 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP50_RS05205 (WHP50_05205) | ctsT | 1004928..1005230 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| WHP50_RS05210 (WHP50_05210) | - | 1005227..1005889 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| WHP50_RS05215 (WHP50_05215) | - | 1005886..1006338 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| WHP50_RS05220 (WHP50_05220) | hemD | 1006335..1006964 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| WHP50_RS05225 (WHP50_05225) | thiE | 1006942..1007574 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| WHP50_RS05230 (WHP50_05230) | thiD | 1007564..1008376 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP50_RS05235 (WHP50_05235) | - | 1008373..1009059 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| WHP50_RS05240 (WHP50_05240) | - | 1009056..1009817 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=953621 WHP50_RS05205 WP_002855822.1 1004928..1005230(+) (ctsT) [Campylobacter jejuni strain Z1322HCJ0003]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=953621 WHP50_RS05205 WP_002855822.1 1004928..1005230(+) (ctsT) [Campylobacter jejuni strain Z1322HCJ0003]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |