Detailed information NTG0953620

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: WHP50_RS05200
• Genome accession: NZ_CP148264
• Coordinates: 1004200..1004931 (+)
• Length: 243 a.a.
• NCBI ID: WP_002869050.1
• Uniprot ID: A0A5T0SGW6
• Organism: Campylobacter jejuni strain Z1322HCJ0003
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 999200..1009931

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP50_RS05170 (WHP50_05170)	rpsF	999346..999720 (+)	375	WP_002890070.1	30S ribosomal protein S6	-
WHP50_RS05175 (WHP50_05175)	ssb	999732..1000280 (+)	549	WP_002890071.1	single-stranded DNA-binding protein	-
WHP50_RS05180 (WHP50_05180)	rpsR	1000291..1000551 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
WHP50_RS05185 (WHP50_05185)	lon	1000611..1002986 (-)	2376	WP_002853487.1	endopeptidase La	-
WHP50_RS05190 (WHP50_05190)	-	1003003..1003650 (-)	648	WP_002852961.1	outer membrane protein assembly factor BamD	-
WHP50_RS05195 (WHP50_05195)	fliW	1003811..1004200 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
WHP50_RS05200 (WHP50_05200)	proC	1004200..1004931 (+)	732	WP_002869050.1	pyrroline-5-carboxylate reductase	Machinery gene
WHP50_RS05205 (WHP50_05205)	ctsT	1004928..1005230 (+)	303	WP_002855822.1	transformation system protein	Machinery gene
WHP50_RS05210 (WHP50_05210)	-	1005227..1005889 (+)	663	WP_002866103.1	hypothetical protein	-
WHP50_RS05215 (WHP50_05215)	-	1005886..1006338 (+)	453	WP_002869049.1	hypothetical protein	-
WHP50_RS05220 (WHP50_05220)	hemD	1006335..1006964 (-)	630	WP_002856298.1	uroporphyrinogen-III synthase	-
WHP50_RS05225 (WHP50_05225)	thiE	1006942..1007574 (-)	633	WP_002856400.1	thiamine phosphate synthase	-
WHP50_RS05230 (WHP50_05230)	thiD	1007564..1008376 (-)	813	WP_002869047.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
WHP50_RS05235 (WHP50_05235)	-	1008373..1009059 (-)	687	WP_002869046.1	3-methyladenine DNA glycosylase	-
WHP50_RS05240 (WHP50_05240)	-	1009056..1009817 (-)	762	WP_002856328.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26543.96 Da
• Isoelectric Point: 8.5934

>NTDB_id=953620 WHP50_RS05200 WP_002869050.1 1004200..1004931(+) (proC) [Campylobacter jejuni strain Z1322HCJ0003]
MLYILANGAMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=953620 WHP50_RS05200 WP_002869050.1 1004200..1004931(+) (proC) [Campylobacter jejuni strain Z1322HCJ0003]
ATGCTCTATATACTTGCAAATGGAGCTATGGCAACAGCCTTAGCCTATGGATTAAAAGATGATTATGAAATTTGCATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCAGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

3D structure

• AlphaFold DB: A0A5T0SGW6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	100	100	1