Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   Q3A86_RS19940 Genome accession   NZ_CP172414
Coordinates   4641027..4642151 (-) Length   374 a.a.
NCBI ID   WP_031047520.1    Uniprot ID   A0ABS7W1G9
Organism   Streptomyces sp. NBUA17     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4636027..4647151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3A86_RS19910 (Q3A86_19910) cseB 4636362..4637063 (-) 702 WP_031047495.1 two-component system response regulator CseB -
  Q3A86_RS19915 (Q3A86_19915) - 4637107..4637778 (-) 672 WP_399139705.1 hypothetical protein -
  Q3A86_RS19920 (Q3A86_19920) - 4637766..4638305 (-) 540 WP_031047501.1 SigE family RNA polymerase sigma factor -
  Q3A86_RS19925 (Q3A86_19925) - 4638592..4639542 (-) 951 WP_399139707.1 A/G-specific adenine glycosylase -
  Q3A86_RS19930 (Q3A86_19930) - 4639751..4639981 (-) 231 Protein_3921 phosphatase PAP2 family protein -
  Q3A86_RS19935 (Q3A86_19935) - 4640087..4640959 (+) 873 WP_359925980.1 hypothetical protein -
  Q3A86_RS19940 (Q3A86_19940) disA 4641027..4642151 (-) 1125 WP_031047520.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  Q3A86_RS19945 (Q3A86_19945) radA/sms 4642233..4643642 (-) 1410 WP_224308721.1 DNA repair protein RadA Machinery gene
  Q3A86_RS19950 (Q3A86_19950) - 4643898..4645714 (+) 1817 Protein_3925 hypothetical protein -
  Q3A86_RS19955 (Q3A86_19955) - 4645767..4646609 (-) 843 WP_031047530.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40061.80 Da        Isoelectric Point: 5.0058

>NTDB_id=953522 Q3A86_RS19940 WP_031047520.1 4641027..4642151(-) (disA) [Streptomyces sp. NBUA17]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTSLRDGLERVLRGNTGGLIVLGSDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQMLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDKLSHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=953522 Q3A86_RS19940 WP_031047520.1 4641027..4642151(-) (disA) [Streptomyces sp. NBUA17]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCGCCCGGCACCTCCCTGCGCGACGGCCTGGAGCGGGTCCTGCGCGGCAACACCGGCGGTCTGATCGTGC
TGGGTTCCGACAAGACCGTCGAGTCGATGTGCACGGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCTCCTCGGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAGATGCTCCC
GGACCCCACGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCCG
TCGTGTCCGTCTCGCAGTCCATGCGGCTGATCGCGCTGTACGTCGACGGGCAGCGGCGCGTGCTGGAGGACTCGGCGGCG
ATCCTGTCCCGGGCCAACCAGGCGCTGGCCACCCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTCTCGGCTGTCGCACAGCGCCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACGGACGGGCGGCTGCTCGCGCTGCAGTTGGACGAGCTGATCGCC
GGTGTGGAGCCGGAGCGCGAGCTGGTCGTGCGGGACTACGTGCCCGAGCCGACCGCGAAGCGGTCCCGTACGGTCGACGA
GGCGCTGGCCGAGCTGGACAAGCTCAGCCACGCCGAGCTGCTCGAACTGTCCACGGTGGCCCGTGCCCTGGGCTACACCG
GGTCGCCCGAGACGCTGGACTCCGCCGTGTCGCCGCGCGGGTTCCGGCTCCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTGCAGACGGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTGCGCGAGGGTCTGTCGCGGCTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444