Detailed information NTG0095308

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AAA985_RS11450
• Genome accession: NZ_AP028603
• Coordinates: 2179114..2180211 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain Pne2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2174114..2185211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA985_RS11425 (TKY181970_22140)	pgsA	2174635..2175180 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AAA985_RS11430 (TKY181970_22150)	rodZ	2175191..2176012 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
AAA985_RS11435 (TKY181970_22160)	-	2176054..2177337 (-)	1284	WP_000170189.1	pitrilysin family protein	-
AAA985_RS11440 (TKY181970_22170)	-	2177334..2178584 (-)	1251	WP_000424271.1	pitrilysin family protein	-
AAA985_RS11445 (TKY181970_22180)	yaaA	2178743..2179111 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
AAA985_RS11450 (TKY181970_22190)	recF	2179114..2180211 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
AAA985_RS11455 (TKY181970_22200)	guaB	2180262..2181740 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
AAA985_RS11460 (TKY181970_22210)	trpS	2181892..2182917 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
AAA985_RS11465 (TKY181970_22220)	-	2183123..2184745 (+)	1623	WP_000958769.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=95308 AAA985_RS11450 WP_000266660.1 2179114..2180211(+) (recF) [Streptococcus pneumoniae strain Pne2]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=95308 AAA985_RS11450 WP_000266660.1 2179114..2180211(+) (recF) [Streptococcus pneumoniae strain Pne2]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46