Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   WHP61_RS02890 Genome accession   NZ_CP148214
Coordinates   539472..540656 (+) Length   394 a.a.
NCBI ID   WP_070290022.1    Uniprot ID   A0A0S2UNI5
Organism   Campylobacter jejuni strain Z1323CCJ0059     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 534472..545656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHP61_RS02870 (WHP61_02870) - 536297..536899 (+) 603 WP_070290020.1 gamma-glutamyl-CDP-amidate hydrolase -
  WHP61_RS02875 (WHP61_02875) - 536901..537662 (+) 762 WP_002825812.1 CTP:phosphoglutamine cytidylyltransferase -
  WHP61_RS02880 (WHP61_02880) cysC 537652..538164 (+) 513 WP_002818256.1 cytidine diphosphoramidate kinase -
  WHP61_RS02885 (WHP61_02885) - 538378..539475 (+) 1098 Protein_555 capsular polysaccharide biosynthesis protein -
  WHP61_RS02890 (WHP61_02890) kpsS 539472..540656 (+) 1185 WP_070290022.1 capsule polysaccharide modification protein KpsS Regulator
  WHP61_RS02895 (WHP61_02895) - 540728..541849 (+) 1122 WP_070290024.1 DUF829 domain-containing protein -
  WHP61_RS02900 (WHP61_02900) - 541846..543207 (+) 1362 WP_002890764.1 cytochrome P450 -
  WHP61_RS02905 (WHP61_02905) - 543204..543623 (+) 420 WP_002780440.1 hypothetical protein -
  WHP61_RS02910 (WHP61_02910) acpS 543624..543971 (-) 348 WP_002825806.1 holo-ACP synthase -
  WHP61_RS02915 (WHP61_02915) fliL 543971..544507 (-) 537 WP_218988463.1 flagellar basal body-associated protein FliL -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46873.57 Da        Isoelectric Point: 9.9031

>NTDB_id=952800 WHP61_RS02890 WP_070290022.1 539472..540656(+) (kpsS) [Campylobacter jejuni strain Z1323CCJ0059]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLNFNGGDFFFYTSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPILVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=952800 WHP61_RS02890 WP_070290022.1 539472..540656(+) (kpsS) [Campylobacter jejuni strain Z1323CCJ0059]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGACCTGTGGGAAATTTTTT
TCATCATCTTGCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATACTAGTGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGATATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTATTTTGGTGTGTAATTTTAAGA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0S2UNI5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.223

100

0.982