Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   WHQ12_RS09130 Genome accession   NZ_CP148213
Coordinates   1704122..1704772 (+) Length   216 a.a.
NCBI ID   WP_085105318.1    Uniprot ID   A0A622RBD1
Organism   Campylobacter jejuni strain Z1323CCJ0062     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1699122..1709772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHQ12_RS09075 (WHQ12_09075) - 1699403..1699624 (+) 222 WP_002821399.1 hypothetical protein -
  WHQ12_RS09080 (WHQ12_09080) - 1699679..1699954 (+) 276 WP_052805355.1 hypothetical protein -
  WHQ12_RS09085 (WHQ12_09085) - 1699941..1700360 (+) 420 WP_139896931.1 YopX family protein -
  WHQ12_RS09090 (WHQ12_09090) - 1700365..1701033 (+) 669 WP_072232303.1 hypothetical protein -
  WHQ12_RS09095 (WHQ12_09095) - 1701035..1701226 (+) 192 WP_002840066.1 hypothetical protein -
  WHQ12_RS09100 (WHQ12_09100) - 1701223..1701573 (+) 351 WP_002840065.1 hypothetical protein -
  WHQ12_RS09105 (WHQ12_09105) - 1701756..1702247 (+) 492 WP_071609520.1 YopX family protein -
  WHQ12_RS09110 (WHQ12_09110) - 1702244..1702663 (+) 420 WP_052806035.1 hypothetical protein -
  WHQ12_RS09115 (WHQ12_09115) - 1702693..1702875 (+) 183 WP_002897189.1 YlcI/YnfO family protein -
  WHQ12_RS09120 (WHQ12_09120) - 1702944..1703459 (+) 516 WP_002897191.1 hypothetical protein -
  WHQ12_RS09125 (WHQ12_09125) - 1703456..1704103 (+) 648 WP_085105332.1 hypothetical protein -
  WHQ12_RS09130 (WHQ12_09130) CJE0566 1704122..1704772 (+) 651 WP_085105318.1 DNA/RNA non-specific endonuclease Regulator
  WHQ12_RS09135 (WHQ12_09135) - 1704952..1705170 (+) 219 WP_002801018.1 hypothetical protein -
  WHQ12_RS09140 (WHQ12_09140) - 1705179..1705706 (+) 528 WP_052805217.1 hypothetical protein -
  WHQ12_RS09145 (WHQ12_09145) - 1705703..1706170 (+) 468 WP_043019044.1 hypothetical protein -
  WHQ12_RS09150 (WHQ12_09150) - 1706191..1706601 (+) 411 WP_052795963.1 hypothetical protein -
  WHQ12_RS09155 (WHQ12_09155) - 1707011..1708015 (+) 1005 WP_002897876.1 toxic anion resistance protein -
  WHQ12_RS09160 (WHQ12_09160) - 1708030..1708875 (+) 846 WP_019108610.1 BspA family leucine-rich repeat surface protein -
  WHQ12_RS09165 (WHQ12_09165) - 1708892..1709284 (+) 393 WP_002794923.1 hypothetical protein -
  WHQ12_RS09170 (WHQ12_09170) - 1709286..1709681 (+) 396 WP_002840681.1 hypothetical protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25508.01 Da        Isoelectric Point: 9.7865

>NTDB_id=952786 WHQ12_RS09130 WP_085105318.1 1704122..1704772(+) (CJE0566) [Campylobacter jejuni strain Z1323CCJ0062]
MKKLMILPLLATLAFADYTQYKPSEDFAKYFTKQSCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYVKILKGDNFKECYQVPNHEVEDESIRSYQIKCQF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=952786 WHQ12_RS09130 WP_085105318.1 1704122..1704772(+) (CJE0566) [Campylobacter jejuni strain Z1323CCJ0062]
ATGAAAAAACTTATGATTTTACCGTTGCTAGCAACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAGCAAAGTTGTTCACAAGTTTTAGATAAGTTTTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGATTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGACACACTCT
TTCTAATGCTTCAATGCGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAATATCACTCCTCAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCGCAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTATGTTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAGTATAAGATCTTATCAGATCAAGT
GTCAATTCTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(27-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A622RBD1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

93.458

99.074

0.926
  CJE1441 Campylobacter jejuni RM1221

92.056

99.074

0.912