Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP58_RS01585 | Genome accession | NZ_CP148206 |
| Coordinates | 301691..301993 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0066 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 296691..306993
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP58_RS01550 (WHP58_01550) | - | 297104..297865 (+) | 762 | WP_002852748.1 | ATP-binding protein | - |
| WHP58_RS01555 (WHP58_01555) | - | 297862..298548 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP58_RS01560 (WHP58_01560) | thiD | 298545..299357 (+) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP58_RS01565 (WHP58_01565) | thiE | 299347..299979 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP58_RS01570 (WHP58_01570) | hemD | 299957..300586 (+) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| WHP58_RS01575 (WHP58_01575) | - | 300583..301035 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP58_RS01580 (WHP58_01580) | - | 301032..301694 (-) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP58_RS01585 (WHP58_01585) | ctsT | 301691..301993 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP58_RS01590 (WHP58_01590) | proC | 301990..302721 (-) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP58_RS01595 (WHP58_01595) | fliW | 302721..303110 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP58_RS01600 (WHP58_01600) | - | 303271..303918 (+) | 648 | WP_052823130.1 | outer membrane protein assembly factor BamD | - |
| WHP58_RS01605 (WHP58_01605) | lon | 303935..306310 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHP58_RS01610 (WHP58_01610) | rpsR | 306370..306630 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952683 WHP58_RS01585 WP_002853046.1 301691..301993(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0066]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952683 WHP58_RS01585 WP_002853046.1 301691..301993(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0066]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |