Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ30_RS03310 | Genome accession | NZ_CP148182 |
| Coordinates | 651831..652133 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0095 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 646831..657133
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ30_RS03275 (WHQ30_03275) | - | 647244..648005 (+) | 762 | WP_002867190.1 | ATP-binding protein | - |
| WHQ30_RS03280 (WHQ30_03280) | - | 648002..648688 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ30_RS03285 (WHQ30_03285) | thiD | 648685..649497 (+) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ30_RS03290 (WHQ30_03290) | thiE | 649487..650119 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ30_RS03295 (WHQ30_03295) | hemD | 650097..650726 (+) | 630 | WP_234729001.1 | uroporphyrinogen-III synthase | - |
| WHQ30_RS03300 (WHQ30_03300) | - | 650723..651175 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ30_RS03305 (WHQ30_03305) | - | 651172..651834 (-) | 663 | WP_146263321.1 | hypothetical protein | - |
| WHQ30_RS03310 (WHQ30_03310) | ctsT | 651831..652133 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ30_RS03315 (WHQ30_03315) | proC | 652130..652861 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ30_RS03320 (WHQ30_03320) | fliW | 652861..653250 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ30_RS03325 (WHQ30_03325) | - | 653411..654058 (+) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| WHQ30_RS03330 (WHQ30_03330) | lon | 654075..656450 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHQ30_RS03335 (WHQ30_03335) | rpsR | 656510..656770 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952368 WHQ30_RS03310 WP_002853046.1 651831..652133(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0095]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952368 WHQ30_RS03310 WP_002853046.1 651831..652133(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0095]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |