Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   ACH6FZ_RS06405 Genome accession   NZ_CP172361
Coordinates   1228715..1229368 (+) Length   217 a.a.
NCBI ID   WP_011049930.1    Uniprot ID   -
Organism   Campylobacter jejuni strain YH023     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1223715..1234368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH6FZ_RS06360 (ACH6FZ_06360) - 1224453..1224683 (-) 231 WP_002787283.1 hypothetical protein -
  ACH6FZ_RS06365 (ACH6FZ_06365) - 1224649..1224912 (-) 264 WP_002787281.1 hypothetical protein -
  ACH6FZ_RS06370 (ACH6FZ_06370) - 1224969..1225256 (-) 288 WP_002787279.1 YopX family protein -
  ACH6FZ_RS06375 (ACH6FZ_06375) - 1225309..1225809 (-) 501 WP_230094574.1 phage antirepressor KilAC domain-containing protein -
  ACH6FZ_RS06380 (ACH6FZ_06380) - 1225815..1226039 (-) 225 WP_002858343.1 Rha family transcriptional regulator -
  ACH6FZ_RS06385 (ACH6FZ_06385) - 1226470..1226754 (-) 285 WP_002788580.1 hypothetical protein -
  ACH6FZ_RS06390 (ACH6FZ_06390) - 1226751..1226954 (-) 204 WP_002870299.1 hypothetical protein -
  ACH6FZ_RS06395 (ACH6FZ_06395) - 1227159..1227812 (+) 654 WP_002870336.1 hypothetical protein -
  ACH6FZ_RS06400 (ACH6FZ_06400) - 1228047..1228709 (+) 663 WP_002870274.1 S24/S26 family peptidase -
  ACH6FZ_RS06405 (ACH6FZ_06405) CJE1441 1228715..1229368 (+) 654 WP_011049930.1 DNA/RNA non-specific endonuclease Regulator
  ACH6FZ_RS06410 (ACH6FZ_06410) - 1229385..1229666 (+) 282 WP_002870263.1 PLDc N-terminal domain-containing protein -
  ACH6FZ_RS06415 (ACH6FZ_06415) - 1229680..1229877 (-) 198 WP_002913413.1 hypothetical protein -
  ACH6FZ_RS06420 (ACH6FZ_06420) - 1229795..1230214 (-) 420 WP_002870261.1 hypothetical protein -
  ACH6FZ_RS06425 (ACH6FZ_06425) - 1230443..1230904 (-) 462 WP_002870260.1 DUF5675 family protein -
  ACH6FZ_RS06430 (ACH6FZ_06430) - 1230953..1232236 (-) 1284 WP_002788854.1 hypothetical protein -
  ACH6FZ_RS06435 (ACH6FZ_06435) - 1232233..1232607 (-) 375 WP_395766093.1 DUF1353 domain-containing protein -
  ACH6FZ_RS06440 (ACH6FZ_06440) - 1232600..1232983 (-) 384 WP_002869963.1 hypothetical protein -
  ACH6FZ_RS06445 (ACH6FZ_06445) - 1232980..1233615 (-) 636 WP_002789149.1 DUF4376 domain-containing protein -
  ACH6FZ_RS06450 (ACH6FZ_06450) - 1233628..1234077 (-) 450 WP_002896804.1 hypothetical protein -

Sequence

Protein


Download         Length: 217 a.a.        Molecular weight: 25531.02 Da        Isoelectric Point: 9.8742

>NTDB_id=952357 ACH6FZ_RS06405 WP_011049930.1 1228715..1229368(+) (CJE1441) [Campylobacter jejuni strain YH023]
MKKLIILSLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYINCYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF

Nucleotide


Download         Length: 654 bp        

>NTDB_id=952357 ACH6FZ_RS06405 WP_011049930.1 1228715..1229368(+) (CJE1441) [Campylobacter jejuni strain YH023]
ATGAAAAAACTTATAATCTTATCTTTATTATCCACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTGGATAAATTTTATTATATTAATTGTTATGATTATTCTTTAA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATTCCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTACGACAGGGGACACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAACATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGACAATAATCCACAAAGAATAAAAAACAATATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCTAATCACGATGTAGAAAATGAGAATTTAAGAATATATAAAGTAAAAT
GTGACAATTTTTAA

Domains

Predicted by InterProScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(27-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

100

100

1
  CJE0566 Campylobacter jejuni RM1221

91.163

99.078

0.903