Detailed information NTG0952170

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: WHQ47_RS05335
• Genome accession: NZ_CP148172
• Coordinates: 1023742..1024473 (+)
• Length: 243 a.a.
• NCBI ID: WP_002859150.1
• Uniprot ID: A0AB36G763
• Organism: Campylobacter jejuni strain Z1323HCJ0023
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1018742..1029473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHQ47_RS05305 (WHQ47_05305)	rpsF	1018885..1019262 (+)	378	WP_002853062.1	30S ribosomal protein S6	-
WHQ47_RS05310 (WHQ47_05310)	ssb	1019271..1019822 (+)	552	WP_002853013.1	single-stranded DNA-binding protein	-
WHQ47_RS05315 (WHQ47_05315)	rpsR	1019833..1020093 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
WHQ47_RS05320 (WHQ47_05320)	lon	1020153..1022528 (-)	2376	WP_002852988.1	endopeptidase La	-
WHQ47_RS05325 (WHQ47_05325)	-	1022545..1023192 (-)	648	WP_002852961.1	outer membrane protein assembly factor BamD	-
WHQ47_RS05330 (WHQ47_05330)	fliW	1023353..1023742 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
WHQ47_RS05335 (WHQ47_05335)	proC	1023742..1024473 (+)	732	WP_002859150.1	pyrroline-5-carboxylate reductase	Machinery gene
WHQ47_RS05340 (WHQ47_05340)	ctsT	1024470..1024772 (+)	303	WP_002853046.1	type II secretion system protein	Machinery gene
WHQ47_RS05345 (WHQ47_05345)	-	1024769..1025431 (+)	663	WP_002858296.1	hypothetical protein	-
WHQ47_RS05350 (WHQ47_05350)	-	1025428..1025880 (+)	453	WP_002859148.1	hypothetical protein	-
WHQ47_RS05355 (WHQ47_05355)	hemD	1025877..1026506 (-)	630	WP_002852819.1	uroporphyrinogen-III synthase	-
WHQ47_RS05360 (WHQ47_05360)	thiE	1026484..1027116 (-)	633	WP_002852670.1	thiamine phosphate synthase	-
WHQ47_RS05365 (WHQ47_05365)	thiD	1027106..1027918 (-)	813	WP_338842138.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
WHQ47_RS05370 (WHQ47_05370)	-	1027915..1028601 (-)	687	WP_002852847.1	endonuclease III domain-containing protein	-
WHQ47_RS05375 (WHQ47_05375)	-	1028598..1029359 (-)	762	WP_002852748.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26559.95 Da
• Isoelectric Point: 8.5934

>NTDB_id=952170 WHQ47_RS05335 WP_002859150.1 1023742..1024473(+) (proC) [Campylobacter jejuni strain Z1323HCJ0023]
MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=952170 WHQ47_RS05335 WP_002859150.1 1023742..1024473(+) (proC) [Campylobacter jejuni strain Z1323HCJ0023]
ATGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGGTTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAGCATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GAGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	99.588	100	0.996