Detailed information NTG0095185

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AABA08_RS10410
• Genome accession: NZ_AP028602
• Coordinates: 2034205..2035302 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain PF2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2029205..2040302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA08_RS10385 (TKY092604_20090)	pgsA	2029726..2030271 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AABA08_RS10390 (TKY092604_20100)	rodZ	2030282..2031103 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
AABA08_RS10395 (TKY092604_20110)	yfmH	2031145..2032428 (-)	1284	WP_000170191.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
AABA08_RS10400 (TKY092604_20120)	yfmF	2032425..2033675 (-)	1251	WP_000424276.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
AABA08_RS10405 (TKY092604_20130)	yaaA	2033834..2034202 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
AABA08_RS10410 (TKY092604_20140)	recF	2034205..2035302 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
AABA08_RS10415 (TKY092604_20150)	guaB	2035352..2036830 (-)	1479	WP_000073400.1	IMP dehydrogenase	-
AABA08_RS10420 (TKY092604_20160)	trpS	2036982..2038007 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
AABA08_RS10425 (TKY092604_20170)	-	2038213..2039835 (+)	1623	WP_000958769.1	ABC-F family ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=95185 AABA08_RS10410 WP_000266660.1 2034205..2035302(+) (recF) [Streptococcus pneumoniae strain PF2]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=95185 AABA08_RS10410 WP_000266660.1 2034205..2035302(+) (recF) [Streptococcus pneumoniae strain PF2]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46