Detailed information NTG0951087

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACHP5H_RS21235
• Genome accession: NZ_CP172194
• Coordinates: 4478108..4479133 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GF66.1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4473108..4484133

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHP5H_RS21215 (ACHP5H_21215)	-	4473517..4474653 (-)	1137	Protein_4148	ISAs1-like element ISEc1 family transposase	-
ACHP5H_RS21220 (ACHP5H_21220)	-	4474787..4475179 (-)	393	Protein_4149	DUF6531 domain-containing protein	-
ACHP5H_RS21225 (ACHP5H_21225)	rpmE	4475339..4475551 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACHP5H_RS21230 (ACHP5H_21230)	priA	4475754..4477952 (+)	2199	WP_021557385.1	primosomal protein N'	Machinery gene
ACHP5H_RS21235 (ACHP5H_21235)	cytR	4478108..4479133 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACHP5H_RS21240 (ACHP5H_21240)	ftsN	4479225..4480184 (+)	960	WP_000068837.1	cell division protein FtsN	-
ACHP5H_RS21245 (ACHP5H_21245)	hslV	4480277..4480807 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACHP5H_RS21250 (ACHP5H_21250)	hslU	4480817..4482148 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACHP5H_RS21255 (ACHP5H_21255)	menA	4482215..4483141 (+)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACHP5H_RS21260 (ACHP5H_21260)	rraA	4483234..4483719 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=951087 ACHP5H_RS21235 WP_000644904.1 4478108..4479133(+) (cytR) [Escherichia coli strain GF66.1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=951087 ACHP5H_RS21235 WP_000644904.1 4478108..4479133(+) (cytR) [Escherichia coli strain GF66.1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATAGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTAATGGCACTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCACGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628