Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   WHO62_RS17215 Genome accession   NZ_CP148114
Coordinates   3255015..3255914 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis isolate FELIX_MS506     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3250015..3260914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO62_RS17180 mrpE 3250255..3250731 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  WHO62_RS17185 mrpF 3250731..3251015 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  WHO62_RS17190 mnhG 3250999..3251373 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  WHO62_RS17195 yuxO 3251412..3251792 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  WHO62_RS17200 comA 3251811..3252455 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  WHO62_RS17205 comP 3252536..3254845 (-) 2310 WP_003242894.1 two-component system sensor histidine kinase ComP Regulator
  WHO62_RS17210 comX 3254860..3255027 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  WHO62_RS17215 comQ 3255015..3255914 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  WHO62_RS17220 degQ 3256099..3256239 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  WHO62_RS17225 - 3256461..3256586 (+) 126 WP_003228793.1 hypothetical protein -
  WHO62_RS17230 - 3256700..3257068 (+) 369 WP_003243784.1 hypothetical protein -
  WHO62_RS17235 pdeH 3257044..3258273 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  WHO62_RS17240 pncB 3258410..3259882 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  WHO62_RS17245 pncA 3259898..3260449 (-) 552 WP_003243099.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=950951 WHO62_RS17215 WP_003243039.1 3255015..3255914(-) (comQ) [Bacillus subtilis isolate FELIX_MS506]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=950951 WHO62_RS17215 WP_003243039.1 3255015..3255914(-) (comQ) [Bacillus subtilis isolate FELIX_MS506]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1