Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   WHO32_RS02190 Genome accession   NZ_CP148112
Coordinates   431969..432919 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis isolate FELIX_MS504     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 426969..437919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO32_RS02165 rapC 428428..429576 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  WHO32_RS02170 phrC 429560..429682 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  WHO32_RS02175 yczM 429782..429871 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  WHO32_RS02180 yczN 429953..430066 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  WHO32_RS02185 thrD 430220..431584 (-) 1365 WP_003234493.1 aspartate kinase -
  WHO32_RS02190 ceuB 431969..432919 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  WHO32_RS02195 yclO 432912..433859 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  WHO32_RS02200 yclP 433853..434611 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  WHO32_RS02205 yclQ 434633..435586 (+) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  WHO32_RS02210 ycnB 435633..437051 (-) 1419 WP_003246604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=950806 WHO32_RS02190 WP_003234491.1 431969..432919(+) (ceuB) [Bacillus subtilis isolate FELIX_MS504]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=950806 WHO32_RS02190 WP_003234491.1 431969..432919(+) (ceuB) [Bacillus subtilis isolate FELIX_MS504]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522