Detailed information NTG0095066

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AAA982_RS10545
• Genome accession: NZ_AP028601
• Coordinates: 2038575..2039672 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266670.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PF1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2033575..2044672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA982_RS10520 (TKY113292_20300)	pgsA	2034096..2034641 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AAA982_RS10525 (TKY113292_20310)	rodZ	2034652..2035473 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
AAA982_RS10530 (TKY113292_20320)	-	2035515..2036798 (-)	1284	WP_000170183.1	pitrilysin family protein	-
AAA982_RS10535 (TKY113292_20330)	-	2036795..2038045 (-)	1251	WP_000424272.1	pitrilysin family protein	-
AAA982_RS10540 (TKY113292_20340)	yaaA	2038204..2038572 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
AAA982_RS10545 (TKY113292_20350)	recF	2038575..2039672 (+)	1098	WP_000266670.1	DNA replication/repair protein RecF	Machinery gene
AAA982_RS10550 (TKY113292_20360)	guaB	2039723..2041201 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
AAA982_RS10555 (TKY113292_20370)	trpS	2041353..2042378 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
AAA982_RS10560 (TKY113292_20380)	-	2042584..2044206 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41927.06 Da
• Isoelectric Point: 9.3082

>NTDB_id=95066 AAA982_RS10545 WP_000266670.1 2038575..2039672(+) (recF) [Streptococcus pneumoniae strain PF1]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSVQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQNGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=95066 AAA982_RS10545 WP_000266670.1 2038575..2039672(+) (recF) [Streptococcus pneumoniae strain PF1]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAGCTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGTTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGAATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	46.175	100	0.463