Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   WHL98_RS02200 Genome accession   NZ_CP148104
Coordinates   433232..434182 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS438     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 428232..439182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL98_RS02175 rapC 429691..430839 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  WHL98_RS02180 phrC 430823..430945 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  WHL98_RS02185 yczM 431045..431134 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  WHL98_RS02190 yczN 431216..431329 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  WHL98_RS02195 thrD 431483..432847 (-) 1365 WP_009966541.1 aspartate kinase -
  WHL98_RS02200 ceuB 433232..434182 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  WHL98_RS02205 yclO 434175..435122 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  WHL98_RS02210 yclP 435116..435874 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  WHL98_RS02215 yclQ 435896..436849 (+) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  WHL98_RS02220 ycnB 436896..438314 (-) 1419 WP_003246604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=950567 WHL98_RS02200 WP_003234491.1 433232..434182(+) (ceuB) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=950567 WHL98_RS02200 WP_003234491.1 433232..434182(+) (ceuB) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522