Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   WHL49_RS02195 Genome accession   NZ_CP148103
Coordinates   432771..433721 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS361     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 427771..438721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL49_RS02170 rapC 429230..430378 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  WHL49_RS02175 phrC 430362..430484 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  WHL49_RS02180 yczM 430584..430673 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  WHL49_RS02185 yczN 430755..430868 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  WHL49_RS02190 thrD 431022..432386 (-) 1365 WP_009966541.1 aspartate kinase -
  WHL49_RS02195 ceuB 432771..433721 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  WHL49_RS02200 yclO 433714..434661 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  WHL49_RS02205 yclP 434655..435413 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  WHL49_RS02210 yclQ 435435..436388 (+) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  WHL49_RS02215 ycnB 436435..437853 (-) 1419 WP_003246604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=950481 WHL49_RS02195 WP_003234491.1 432771..433721(+) (ceuB) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=950481 WHL49_RS02195 WP_003234491.1 432771..433721(+) (ceuB) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522