Detailed information NTG0950441

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: WHL51_RS12805
• Genome accession: NZ_CP148102
• Coordinates: 2499921..2502251 (-)
• Length: 776 a.a.
• NCBI ID: WP_003226149.1
• Uniprot ID: -
• Organism: Bacillus spizizenii str. W23
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2494921..2507251

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHL51_RS12770	-	2495259..2495597 (-)	339	WP_003226161.1	YqxA family protein	-
WHL51_RS12775	spoIIP	2495614..2496819 (-)	1206	WP_003226159.1	spore autolysin SpoIIP	-
WHL51_RS12780	gpr	2496882..2497988 (-)	1107	WP_003226157.1	GPR endopeptidase	-
WHL51_RS12785	rpsT	2498192..2498458 (+)	267	WP_003226155.1	30S ribosomal protein S20	-
WHL51_RS12790	holA	2498473..2499516 (-)	1044	WP_003226154.1	DNA polymerase III subunit delta	-
WHL51_RS12795	-	2499556..2499705 (-)	150	WP_136975859.1	hypothetical protein	-
WHL51_RS12800	-	2499746..2499880 (+)	135	WP_003226152.1	YqzM family protein	-
WHL51_RS12805	comEC	2499921..2502251 (-)	2331	WP_003226149.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
WHL51_RS12810	-	2502255..2502824 (-)	570	WP_003226147.1	ComE operon protein 2	-
WHL51_RS12815	comEA	2502891..2503508 (-)	618	WP_003226145.1	helix-hairpin-helix domain-containing protein	Machinery gene
WHL51_RS12820	comER	2503592..2504413 (+)	822	WP_003226143.1	late competence protein ComER	-
WHL51_RS12825	-	2504479..2505222 (-)	744	WP_003226141.1	class I SAM-dependent methyltransferase	-
WHL51_RS12830	rsfS	2505219..2505575 (-)	357	WP_003226139.1	ribosome silencing factor	-
WHL51_RS12835	yqeK	2505593..2506153 (-)	561	WP_003226137.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
WHL51_RS12840	-	2506143..2506712 (-)	570	WP_003226135.1	nicotinate-nucleotide adenylyltransferase	-
WHL51_RS12845	yhbY	2506724..2507014 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86621.22 Da
• Isoelectric Point: 7.9910

>NTDB_id=950441 WHL51_RS12805 WP_003226149.1 2499921..2502251(-) (comEC) [Bacillus spizizenii str. W23]
MRNSRLLLPLAAASATAGITAAAYFSAVFLFFLFLLIVLIKTRHAFLIFVCFFSFILFFSLYAVTDSQNVSLYQRGTYQF
KAVIDSIPKIDGDRMSMVVKTPDSEKWAASYRIQSADEKDRLSYIEPGMACELTGSLEEPKHSTVPGTFDYNEYLYQQHI
HWNYSVTSIQNCSEPANFMYKLLSLRKYIISFTNDLLPPNSAGIVQALTVGDRFNVEDEVLNAYQKIGVVHLLAISGLHI
GILTAGLFYIMIRIGITREKASIMLLLFLPLYVVLTGAAPSVLRAALMSGIYLAGSLVKWRVHSAGAVCLSYIVLLLFNP
YYLFEAGFQLSFAVSFSLILSSSIFKRVKTFLGQLAMVSMIAQLGSLPILLYHFQQFSIISIPMNMVLVPFYTFCVLPGA
IAGVFLLSLSVSAGRLFFGWFDFLMSWANKLITKIAEIDVFTIIIARPAPALLFLFIATIILLLMAIEKRSFSQLMVTGG
MCCAVLSLLFIYPRLSSEGEVDMIDIGQGDSMYVGAPHQRGHVLIDTGGTLPYLSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQAAREEGVPIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMKTGGMSWVLTGDLEKEGEQEVMNVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAIISAGIN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYSPYDTSDIAETN

Nucleotide

• Length: 2331 bp

>NTDB_id=950441 WHL51_RS12805 WP_003226149.1 2499921..2502251(-) (comEC) [Bacillus spizizenii str. W23]
ATGCGTAATTCGCGTTTGTTATTGCCTTTGGCGGCAGCTTCGGCAACTGCTGGAATTACTGCCGCCGCTTATTTCTCCGC
TGTTTTTCTCTTCTTCCTCTTTCTCCTCATCGTTTTAATCAAAACGAGACACGCTTTTCTCATTTTTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTTCACTGTATGCAGTCACAGACTCCCAGAATGTCTCTTTATATCAGCGGGGCACCTATCAATTC
AAGGCAGTGATTGACAGTATTCCTAAAATTGATGGTGACCGTATGTCTATGGTAGTTAAGACGCCTGATAGTGAAAAATG
GGCCGCATCGTATCGCATTCAGTCTGCTGATGAAAAAGATCGGCTTTCATACATAGAACCAGGAATGGCATGTGAATTAA
CTGGTTCATTGGAAGAACCGAAACATTCAACTGTGCCGGGTACATTTGATTATAACGAATATCTTTACCAACAGCATATT
CACTGGAACTACTCTGTCACATCAATCCAAAATTGCAGCGAACCTGCAAATTTTATGTATAAGCTGCTCAGTTTGAGAAA
ATACATTATATCATTCACAAACGACCTGCTGCCTCCTAATTCGGCAGGAATCGTACAAGCACTTACAGTCGGTGACAGAT
TTAATGTGGAAGACGAAGTGCTTAACGCGTATCAAAAGATTGGTGTCGTCCATCTCTTGGCGATTTCAGGACTCCACATT
GGCATTTTGACAGCCGGCTTGTTTTATATCATGATCCGTATTGGTATAACAAGAGAAAAGGCGTCAATCATGTTGCTGTT
ATTTCTGCCGCTCTATGTGGTGTTGACGGGCGCTGCTCCTTCAGTGCTTCGCGCCGCTCTGATGTCGGGAATTTACTTAG
CAGGAAGTCTCGTGAAATGGCGTGTACATTCAGCCGGTGCTGTCTGCCTTTCATATATTGTCCTCTTGCTCTTCAATCCT
TACTATCTCTTCGAAGCCGGTTTTCAGCTGTCGTTCGCCGTCAGTTTTTCTTTAATACTTTCCTCTTCTATTTTTAAGCG
TGTCAAAACCTTCTTAGGTCAGCTGGCAATGGTATCGATGATCGCTCAGCTGGGCTCACTTCCTATTCTCCTGTATCATT
TCCAGCAGTTTTCTATAATTAGCATACCGATGAACATGGTGCTGGTTCCTTTTTATACATTCTGCGTTTTGCCGGGAGCT
ATAGCAGGTGTTTTTCTATTAAGCCTTTCCGTTTCTGCCGGTCGATTGTTTTTCGGCTGGTTTGATTTCTTGATGAGCTG
GGCCAACAAGCTCATCACAAAAATTGCAGAGATTGATGTATTCACGATCATCATTGCACGCCCCGCACCTGCTCTGCTCT
TTTTGTTCATAGCCACGATAATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTTTCGCAGCTGATGGTAACTGGCGGC
ATGTGTTGCGCTGTGCTCAGTCTTCTCTTTATTTATCCTCGTCTTAGTTCTGAAGGAGAGGTCGATATGATTGATATTGG
GCAGGGTGACAGCATGTATGTAGGTGCTCCGCATCAGCGAGGCCATGTCTTAATTGATACTGGCGGCACTTTGCCTTACT
TGTCAGAGCCTTGGCGGGAAAAACAGCACCCGTTTTCACTGGGAGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATTAAACAGCTTGATGCTTTAATTCTGACGCACGCTGACCAAGATCATATTGGAGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTGAAGCGCCTAGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGACGAAAAAGTGCTGCAGGCTGCCAGAGAGG
AGGGAGTGCCAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGACTTGCAGTTCCATGTACTGTCACCGGAA
ACACCTGACCCGGCAAGCAAAAATAATTCTTCTCTCGTTCTGTGGATGAAAACGGGCGGTATGAGCTGGGTATTGACGGG
GGATCTGGAGAAAGAAGGAGAACAGGAGGTAATGAACGTGTTTCCAAATATAAAAGCGGATGTATTAAAGGTGGGGCACC
ATGGAAGCAAAGGCTCTACCGGTGAAGAATTCATCAAACAGCTTCAGCCGAAAACAGCCATTATCTCGGCGGGGATAAAC
AATCGGTACCATCATCCCCATCAAGAAGTTCTGCAATTATTACAAAGACATTCCATCCGCGTGCTCCGCACCGATCAAAA
CGGAACAATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATTCTCCATATGATACATCAGATATAGCAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	88.144	100	0.881