Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   WHL51_RS01910 Genome accession   NZ_CP148102
Coordinates   358455..358853 (-) Length   132 a.a.
NCBI ID   WP_003224919.1    Uniprot ID   E0U2B3
Organism   Bacillus spizizenii str. W23     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 353455..363853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL51_RS01875 - 354284..354411 (+) 128 Protein_340 hypothetical protein -
  WHL51_RS01880 - 354408..354863 (+) 456 WP_003224877.1 RDD family protein -
  WHL51_RS01885 - 354946..355278 (+) 333 WP_003224878.1 YckD family protein -
  WHL51_RS01890 - 355413..355835 (+) 423 WP_003224879.1 MarR family winged helix-turn-helix transcriptional regulator -
  WHL51_RS01895 - 355823..356164 (+) 342 WP_003224880.1 DUF3147 family protein -
  WHL51_RS01900 - 356184..356912 (+) 729 WP_003224881.1 AAA family ATPase -
  WHL51_RS01905 bglC 356985..358418 (+) 1434 WP_003224917.1 6-phospho-beta-glucosidase -
  WHL51_RS01910 nin/comJ 358455..358853 (-) 399 WP_003224919.1 DNA-entry nuclease inhibitor Regulator
  WHL51_RS01915 nucA/comI 358876..359325 (-) 450 WP_136975843.1 DNA-entry nuclease Machinery gene
  WHL51_RS01920 tlpC 359499..361223 (-) 1725 WP_003224925.1 methyl-accepting chemotaxis protein TlpC -
  WHL51_RS01925 hxlB 361336..361893 (-) 558 WP_003224927.1 6-phospho-3-hexuloisomerase -
  WHL51_RS01930 hxlA 361898..362530 (-) 633 WP_003224929.1 3-hexulose-6-phosphate synthase -
  WHL51_RS01935 hxlR 362761..363123 (+) 363 WP_003224931.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14899.87 Da        Isoelectric Point: 4.4698

>NTDB_id=950398 WHL51_RS01910 WP_003224919.1 358455..358853(-) (nin/comJ) [Bacillus spizizenii str. W23]
MIKSWKPQELSISYHQFTVFQKDSAPPVMDWTDEAIEKGFAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
QVTENGIEIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=950398 WHL51_RS01910 WP_003224919.1 358455..358853(-) (nin/comJ) [Bacillus spizizenii str. W23]
TTGATCAAGTCATGGAAGCCACAAGAACTGTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTGCACCTCC
TGTTATGGATTGGACTGACGAAGCGATCGAAAAAGGATTTGCTGCGGCGGACGGAGCGATTTCATTTGAAGCACAGAGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACTGTAAACTCCTACGAAAAGAAAGTGACTGTTCCTTTT
CAAGTCACAGAAAACGGAATTGAAATTGAAAGCATTATGTCTAAAAGGCTGTCCTTTGATCTTCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAGATGTCAGATCTGCATGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0U2B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

96.212

100

0.962